RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 NISCHQ9Y2I1 1504 aa21.07■□□□□ 0.96
PGK1-205ENST00000491291 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
PGK1-205ENST00000491291 ABCC9O60706 1549 aa17.82■□□□□ 0.44
PGK1-205ENST00000491291 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
PGK1-205ENST00000491291 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
PGK1-205ENST00000491291 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
PGK1-205ENST00000491291 NACADO15069 1562 aa17.39■□□□□ 0.37
PGK1-205ENST00000491291 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
PGK1-205ENST00000491291 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
PGK1-205ENST00000491291 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
PGK1-205ENST00000491291 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
PGK1-205ENST00000491291 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
PGK1-205ENST00000491291 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
PGK1-205ENST00000491291 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
PGK1-205ENST00000491291 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
PGK1-205ENST00000491291 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
PGK1-205ENST00000491291 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
PGK1-205ENST00000491291 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
PGK1-205ENST00000491291 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
PGK1-205ENST00000491291 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
PGK1-205ENST00000491291 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
PGK1-205ENST00000491291 WIZO95785 1651 aa16.14■□□□□ 0.17
PGK1-205ENST00000491291 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
PGK1-205ENST00000491291 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
PGK1-205ENST00000491291 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
PGK1-205ENST00000491291 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
PGK1-205ENST00000491291 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
PGK1-205ENST00000491291 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
PGK1-205ENST00000491291 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
PGK1-205ENST00000491291 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
PGK1-205ENST00000491291 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
PGK1-205ENST00000491291 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
PGK1-205ENST00000491291 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
PGK1-205ENST00000491291 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
PGK1-205ENST00000491291 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
PGK1-205ENST00000491291 CFTRP13569 1480 aa15.54■□□□□ 0.08
PGK1-205ENST00000491291 NESP48681 1621 aa15.53■□□□□ 0.08
PGK1-205ENST00000491291 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
PGK1-205ENST00000491291 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
PGK1-205ENST00000491291 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
PGK1-205ENST00000491291 CEP164Q9UPV0 1460 aa15.36■□□□□ 0.05
PGK1-205ENST00000491291 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
PGK1-205ENST00000491291 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
PGK1-205ENST00000491291 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
PGK1-205ENST00000491291 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
PGK1-205ENST00000491291 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
PGK1-205ENST00000491291 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
PGK1-205ENST00000491291 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
PGK1-205ENST00000491291 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
PGK1-205ENST00000491291 CUX1P39880 1505 aa15.23■□□□□ 0.03
PGK1-205ENST00000491291 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
PGK1-205ENST00000491291 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
PGK1-205ENST00000491291 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
PGK1-205ENST00000491291 WDR62O43379 1518 aa15.19■□□□□ 0.02
PGK1-205ENST00000491291 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
PGK1-205ENST00000491291 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
PGK1-205ENST00000491291 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
PGK1-205ENST00000491291 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
PGK1-205ENST00000491291 WDR97A6NE52 1622 aa15.03■□□□□ -0
PGK1-205ENST00000491291 CUX2O14529 1486 aa15.02■□□□□ -0
PGK1-205ENST00000491291 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
PGK1-205ENST00000491291 SOGA1O94964 1423 aa15.02■□□□□ -0
PGK1-205ENST00000491291 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
PGK1-205ENST00000491291 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
PGK1-205ENST00000491291 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
PGK1-205ENST00000491291 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
PGK1-205ENST00000491291 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
PGK1-205ENST00000491291 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
PGK1-205ENST00000491291 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
PGK1-205ENST00000491291 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
PGK1-205ENST00000491291 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
PGK1-205ENST00000491291 EEA1Q15075 1411 aa14.89□□□□□ -0.03
PGK1-205ENST00000491291 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
PGK1-205ENST00000491291 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
PGK1-205ENST00000491291 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■■■■■ 42.7
PGK1-205ENST00000491291 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
PGK1-205ENST00000491291 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
PGK1-205ENST00000491291 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
PGK1-205ENST00000491291 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
PGK1-205ENST00000491291 CUL7Q14999 1698 aa14.81□□□□□ -0.04
PGK1-205ENST00000491291 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
PGK1-205ENST00000491291 IGF1RP08069 1367 aa14.77□□□□□ -0.04
PGK1-205ENST00000491291 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
PGK1-205ENST00000491291 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
PGK1-205ENST00000491291 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
PGK1-205ENST00000491291 KIF21BO75037 1637 aa14.74□□□□□ -0.05
PGK1-205ENST00000491291 CARMIL1Q5VZK9 1371 aa14.72□□□□□ -0.05
PGK1-205ENST00000491291 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
PGK1-205ENST00000491291 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
PGK1-205ENST00000491291 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PGK1-205ENST00000491291 CHD1O14646 1710 aa14.69□□□□□ -0.06
PGK1-205ENST00000491291 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
PGK1-205ENST00000491291 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
PGK1-205ENST00000491291 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
PGK1-205ENST00000491291 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
PGK1-205ENST00000491291 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
PGK1-205ENST00000491291 CTTNBP2Q8WZ74 1663 aa14.62□□□□□ -0.07
PGK1-205ENST00000491291 FBLN2P98095 1184 aa14.62□□□□□ -0.07
PGK1-205ENST00000491291 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
PGK1-205ENST00000491291 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms