RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
TSC22D1-211ENST00000501704 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
TSC22D1-211ENST00000501704 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
TSC22D1-211ENST00000501704 HRCP23327 699 aa24.91■■□□□ 1.58
TSC22D1-211ENST00000501704 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
TSC22D1-211ENST00000501704 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
TSC22D1-211ENST00000501704 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
TSC22D1-211ENST00000501704 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
TSC22D1-211ENST00000501704 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
TSC22D1-211ENST00000501704 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.44
TSC22D1-211ENST00000501704 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
TSC22D1-211ENST00000501704 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
TSC22D1-211ENST00000501704 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
TSC22D1-211ENST00000501704 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.37
TSC22D1-211ENST00000501704 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
TSC22D1-211ENST00000501704 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
TSC22D1-211ENST00000501704 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
TSC22D1-211ENST00000501704 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
TSC22D1-211ENST00000501704 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
TSC22D1-211ENST00000501704 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
TSC22D1-211ENST00000501704 MYT1Q01538 1121 aa23.17■■□□□ 1.3
TSC22D1-211ENST00000501704 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
TSC22D1-211ENST00000501704 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
TSC22D1-211ENST00000501704 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
TSC22D1-211ENST00000501704 GTF3C3Q9Y5Q9 886 aa23■■□□□ 1.27
TSC22D1-211ENST00000501704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
TSC22D1-211ENST00000501704 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
TSC22D1-211ENST00000501704 DIEXFQ68CQ4 756 aaKnown RBP22.89■■□□□ 1.26
TSC22D1-211ENST00000501704 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
TSC22D1-211ENST00000501704 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
TSC22D1-211ENST00000501704 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
TSC22D1-211ENST00000501704 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
TSC22D1-211ENST00000501704 ABCC9O60706 1549 aa22.27■■□□□ 1.16
TSC22D1-211ENST00000501704 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
TSC22D1-211ENST00000501704 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
TSC22D1-211ENST00000501704 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
TSC22D1-211ENST00000501704 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
TSC22D1-211ENST00000501704 MIER1Q8N108 512 aa22.19■■□□□ 1.14
TSC22D1-211ENST00000501704 APLP2Q06481 763 aa22.09■■□□□ 1.13
TSC22D1-211ENST00000501704 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
TSC22D1-211ENST00000501704 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
TSC22D1-211ENST00000501704 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
TSC22D1-211ENST00000501704 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
TSC22D1-211ENST00000501704 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
TSC22D1-211ENST00000501704 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
TSC22D1-211ENST00000501704 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
TSC22D1-211ENST00000501704 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
TSC22D1-211ENST00000501704 BCANQ96GW7 911 aa21.72■■□□□ 1.07
TSC22D1-211ENST00000501704 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
TSC22D1-211ENST00000501704 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
TSC22D1-211ENST00000501704 SOGA1O94964 1423 aa21.63■■□□□ 1.05
TSC22D1-211ENST00000501704 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
TSC22D1-211ENST00000501704 NEFLP07196 543 aa21.62■■□□□ 1.05
TSC22D1-211ENST00000501704 WIZO95785 1651 aa21.61■■□□□ 1.05
TSC22D1-211ENST00000501704 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
TSC22D1-211ENST00000501704 TSHZ2Q9NRE2 1034 aa21.58■■□□□ 1.05
TSC22D1-211ENST00000501704 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
TSC22D1-211ENST00000501704 ITGAEP38570 1179 aa21.51■■□□□ 1.03
TSC22D1-211ENST00000501704 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
TSC22D1-211ENST00000501704 EEA1Q15075 1411 aa21.49■■□□□ 1.03
TSC22D1-211ENST00000501704 FKBP8Q14318 412 aa21.49■■□□□ 1.03
TSC22D1-211ENST00000501704 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
TSC22D1-211ENST00000501704 CLIP1P30622 1438 aa21.45■■□□□ 1.02
TSC22D1-211ENST00000501704 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
TSC22D1-211ENST00000501704 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
TSC22D1-211ENST00000501704 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
TSC22D1-211ENST00000501704 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
TSC22D1-211ENST00000501704 NACADO15069 1562 aa21.27■■□□□ 1
TSC22D1-211ENST00000501704 VPS8Q8N3P4 1428 aa21.27■□□□□ 0.99
TSC22D1-211ENST00000501704 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
TSC22D1-211ENST00000501704 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
TSC22D1-211ENST00000501704 DHX57Q6P158 1386 aaKnown RBP21.21■□□□□ 0.99
TSC22D1-211ENST00000501704 RBM19Q9Y4C8 960 aaKnown RBP21.21■□□□□ 0.99
TSC22D1-211ENST00000501704 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
TSC22D1-211ENST00000501704 ANP32CO43423 234 aa21.15■□□□□ 0.98
TSC22D1-211ENST00000501704 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
TSC22D1-211ENST00000501704 CDK11AQ9UQ88 783 aaPredicted RBP21.1■□□□□ 0.97
TSC22D1-211ENST00000501704 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
TSC22D1-211ENST00000501704 SMARCA2P51531 1590 aa21.08■□□□□ 0.96
TSC22D1-211ENST00000501704 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
TSC22D1-211ENST00000501704 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
TSC22D1-211ENST00000501704 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
TSC22D1-211ENST00000501704 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
TSC22D1-211ENST00000501704 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
TSC22D1-211ENST00000501704 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
TSC22D1-211ENST00000501704 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
TSC22D1-211ENST00000501704 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
TSC22D1-211ENST00000501704 CCNB3Q8WWL7 1395 aa20.93■□□□□ 0.94
TSC22D1-211ENST00000501704 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSC22D1-211ENST00000501704 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
TSC22D1-211ENST00000501704 KIF21BO75037 1637 aa20.9■□□□□ 0.94
TSC22D1-211ENST00000501704 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
TSC22D1-211ENST00000501704 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
TSC22D1-211ENST00000501704 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
TSC22D1-211ENST00000501704 MSH5O43196 834 aa20.77■□□□□ 0.92
TSC22D1-211ENST00000501704 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
TSC22D1-211ENST00000501704 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
TSC22D1-211ENST00000501704 NBR1Q14596 966 aa20.74■□□□□ 0.91
TSC22D1-211ENST00000501704 PPP1R15AO75807 674 aaPredicted RBP20.72■□□□□ 0.91
TSC22D1-211ENST00000501704 SETD5Q9C0A6 1442 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms