Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALMS1Q8TCU4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ALMS1Q8TCU4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALMS1Q8TCU4 AC006015.1-201ENST00000429970 570 ntBASIC15.65■□□□□ 0.1
ALMS1Q8TCU4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.65■□□□□ 0.1
ALMS1Q8TCU4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 AC139426.1-201ENST00000568218 2529 ntBASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 IGHV3-19-201ENST00000521488 291 ntBASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.64■□□□□ 0.09
ALMS1Q8TCU4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALMS1Q8TCU4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ALMS1Q8TCU4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 NTF6G-201ENST00000591094 616 ntBASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 AC073111.5-205ENST00000641717 521 ntBASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 AC126544.1-201ENST00000580842 1059 ntBASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALMS1Q8TCU4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 AC066615.1-201ENST00000640911 628 ntBASIC15.6■□□□□ 0.09
ALMS1Q8TCU4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 CROCCP5-201ENST00000436658 830 ntBASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 AC080038.1-201ENST00000611274 1154 ntBASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 AC245100.8-202ENST00000629247 1058 ntBASIC15.59■□□□□ 0.09
ALMS1Q8TCU4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ALMS1Q8TCU4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ALMS1Q8TCU4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
ALMS1Q8TCU4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
ALMS1Q8TCU4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms