Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SLC38A9Q8NBW4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 SUDS3P1-201ENST00000505831 966 ntBASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SLC38A9Q8NBW4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A9Q8NBW4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.58■■□□□ 1.04
SLC38A9Q8NBW4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 AC099791.2-201ENST00000605725 427 ntBASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 AC138932.3-201ENST00000567634 1902 ntBASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A9Q8NBW4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 AP003733.4-201ENST00000623785 1697 ntBASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SLC38A9Q8NBW4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 AL161729.1-201ENST00000604104 1402 ntBASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 AC142381.2-201ENST00000566120 298 ntBASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 C17orf82-201ENST00000623772 1530 ntBASIC21.55■■□□□ 1.04
SLC38A9Q8NBW4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 SYT6-210ENST00000641643 1587 ntBASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 DUX4L19-201ENST00000557448 1267 ntBASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC38A9Q8NBW4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 EDA-201ENST00000338901 1233 ntBASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC38A9Q8NBW4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 AL355001.2-201ENST00000620617 1191 ntBASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 AC020928.2-201ENST00000588717 2197 ntBASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.52■■□□□ 1.04
SLC38A9Q8NBW4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC38A9Q8NBW4 AC142381.3-201ENST00000568208 1670 ntBASIC21.5■■□□□ 1.03
SLC38A9Q8NBW4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms