Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CCT4P50991 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCT4P50991 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCT4P50991 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.9■■■□□ 2.22
CCT4P50991 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.9■■■□□ 2.22
CCT4P50991 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CCT4P50991 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCT4P50991 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCT4P50991 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.9■■■□□ 2.22
CCT4P50991 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.9■■■□□ 2.22
CCT4P50991 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCT4P50991 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.9■■■□□ 2.22
CCT4P50991 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCT4P50991 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.89■■■□□ 2.22
CCT4P50991 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCT4P50991 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CCT4P50991 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.89■■■□□ 2.22
CCT4P50991 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.89■■■□□ 2.22
CCT4P50991 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.88■■■□□ 2.21
CCT4P50991 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.88■■■□□ 2.21
CCT4P50991 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCT4P50991 AC093323.1-202ENST00000635031 2045 ntBASIC28.88■■■□□ 2.21
CCT4P50991 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
CCT4P50991 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.88■■■□□ 2.21
CCT4P50991 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCT4P50991 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCT4P50991 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCT4P50991 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCT4P50991 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCT4P50991 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.87■■■□□ 2.21
CCT4P50991 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.87■■■□□ 2.21
CCT4P50991 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CCT4P50991 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.87■■■□□ 2.21
CCT4P50991 AL136116.3-201ENST00000402907 1138 ntBASIC28.87■■■□□ 2.21
CCT4P50991 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
CCT4P50991 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 AL356740.2-201ENST00000601559 647 ntBASIC28.86■■■□□ 2.21
CCT4P50991 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.86■■■□□ 2.21
CCT4P50991 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCT4P50991 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
CCT4P50991 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CCT4P50991 MIR638-201ENST00000385237 100 ntBASIC28.85■■■□□ 2.21
CCT4P50991 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.85■■■□□ 2.21
CCT4P50991 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCT4P50991 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCT4P50991 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CCT4P50991 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
CCT4P50991 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.84■■■□□ 2.21
CCT4P50991 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.84■■■□□ 2.21
CCT4P50991 AC005703.6-201ENST00000623265 1329 ntBASIC28.84■■■□□ 2.21
CCT4P50991 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCT4P50991 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
CCT4P50991 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.83■■■□□ 2.21
CCT4P50991 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.83■■■□□ 2.21
CCT4P50991 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 AL139246.5-201ENST00000606645 996 ntBASIC28.83■■■□□ 2.21
CCT4P50991 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.83■■■□□ 2.21
CCT4P50991 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCT4P50991 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CCT4P50991 MIR4466-201ENST00000606121 54 ntBASIC28.82■■■□□ 2.2
CCT4P50991 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCT4P50991 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCT4P50991 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCT4P50991 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.81■■■□□ 2.2
CCT4P50991 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCT4P50991 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCT4P50991 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCT4P50991 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.81■■■□□ 2.2
CCT4P50991 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.81■■■□□ 2.2
CCT4P50991 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CCT4P50991 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
CCT4P50991 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.8■■■□□ 2.2
CCT4P50991 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCT4P50991 ABCB10P4-201ENST00000566803 2184 ntBASIC28.79■■■□□ 2.2
CCT4P50991 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.79■■■□□ 2.2
CCT4P50991 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.79■■■□□ 2.2
CCT4P50991 AL512631.2-201ENST00000604634 923 ntBASIC28.79■■■□□ 2.2
CCT4P50991 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCT4P50991 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
CCT4P50991 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCT4P50991 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCT4P50991 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCT4P50991 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCT4P50991 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
CCT4P50991 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.78■■■□□ 2.2
CCT4P50991 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms