Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.25■■■□□ 2.59
USP6P35125 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.25■■■□□ 2.59
USP6P35125 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
USP6P35125 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.24■■■□□ 2.59
USP6P35125 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.24■■■□□ 2.59
USP6P35125 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
USP6P35125 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
USP6P35125 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
USP6P35125 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
USP6P35125 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
USP6P35125 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP6P35125 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP6P35125 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP6P35125 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP6P35125 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.23■■■□□ 2.59
USP6P35125 AC008764.7-201ENST00000593779 1081 ntBASIC31.23■■■□□ 2.59
USP6P35125 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP6P35125 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.22■■■□□ 2.59
USP6P35125 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP6P35125 AC087623.3-201ENST00000607047 1098 ntBASIC31.22■■■□□ 2.59
USP6P35125 AC009086.3-201ENST00000623486 1008 ntBASIC31.22■■■□□ 2.59
USP6P35125 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP6P35125 AL161729.1-201ENST00000604104 1402 ntBASIC31.21■■■□□ 2.59
USP6P35125 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP6P35125 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP6P35125 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
USP6P35125 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP6P35125 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
USP6P35125 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.2■■■□□ 2.59
USP6P35125 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USP6P35125 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USP6P35125 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
USP6P35125 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
USP6P35125 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
USP6P35125 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
USP6P35125 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.2■■■□□ 2.59
USP6P35125 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.2■■■□□ 2.58
USP6P35125 HLA-L-211ENST00000482052 1765 ntBASIC31.2■■■□□ 2.58
USP6P35125 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.19■■■□□ 2.58
USP6P35125 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.19■■■□□ 2.58
USP6P35125 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP6P35125 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP6P35125 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
USP6P35125 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.18■■■□□ 2.58
USP6P35125 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.18■■■□□ 2.58
USP6P35125 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP6P35125 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP6P35125 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP6P35125 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.18■■■□□ 2.58
USP6P35125 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
USP6P35125 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP6P35125 MIR3181-201ENST00000578512 73 ntBASIC31.18■■■□□ 2.58
USP6P35125 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.18■■■□□ 2.58
USP6P35125 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.18■■■□□ 2.58
USP6P35125 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
USP6P35125 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP6P35125 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.17■■■□□ 2.58
USP6P35125 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.17■■■□□ 2.58
USP6P35125 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.17■■■□□ 2.58
USP6P35125 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP6P35125 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP6P35125 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP6P35125 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
USP6P35125 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.16■■■□□ 2.58
USP6P35125 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP6P35125 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.16■■■□□ 2.58
USP6P35125 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USP6P35125 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.15■■■□□ 2.58
USP6P35125 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USP6P35125 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.15■■■□□ 2.58
USP6P35125 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP6P35125 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP6P35125 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP6P35125 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
USP6P35125 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP6P35125 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.14■■■□□ 2.58
USP6P35125 BX842568.3-201ENST00000418104 571 ntBASIC31.14■■■□□ 2.58
USP6P35125 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP6P35125 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
USP6P35125 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.13■■■□□ 2.57
USP6P35125 IRS3P-201ENST00000223076 1006 ntBASIC31.13■■■□□ 2.57
USP6P35125 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
USP6P35125 AL162430.1-201ENST00000480705 870 ntBASIC31.13■■■□□ 2.57
USP6P35125 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
USP6P35125 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP6P35125 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP6P35125 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
USP6P35125 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.12■■■□□ 2.57
USP6P35125 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP6P35125 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USP6P35125 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms