Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRNP200O75643 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.94■■□□□ 1.1
SNRNP200O75643 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.94■■□□□ 1.1
SNRNP200O75643 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNRNP200O75643 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.94■■□□□ 1.1
SNRNP200O75643 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SNRNP200O75643 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.94■■□□□ 1.1
SNRNP200O75643 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNRNP200O75643 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 AL356740.2-201ENST00000601559 647 ntBASIC21.93■■□□□ 1.1
SNRNP200O75643 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
SNRNP200O75643 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.93■■□□□ 1.1
SNRNP200O75643 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.93■■□□□ 1.1
SNRNP200O75643 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNRNP200O75643 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNRNP200O75643 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNRNP200O75643 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNRNP200O75643 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNRNP200O75643 AC093323.1-202ENST00000635031 2045 ntBASIC21.92■■□□□ 1.1
SNRNP200O75643 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.92■■□□□ 1.1
SNRNP200O75643 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNRNP200O75643 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SNRNP200O75643 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNRNP200O75643 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.91■■□□□ 1.1
SNRNP200O75643 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNRNP200O75643 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.91■■□□□ 1.1
SNRNP200O75643 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SNRNP200O75643 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNRNP200O75643 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNRNP200O75643 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNRNP200O75643 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SNRNP200O75643 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.9■■□□□ 1.1
SNRNP200O75643 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNRNP200O75643 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNRNP200O75643 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNRNP200O75643 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNRNP200O75643 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNRNP200O75643 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNRNP200O75643 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNRNP200O75643 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SNRNP200O75643 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNRNP200O75643 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNRNP200O75643 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.88■■□□□ 1.09
SNRNP200O75643 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SNRNP200O75643 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.88■■□□□ 1.09
SNRNP200O75643 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SNRNP200O75643 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SNRNP200O75643 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SNRNP200O75643 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNRNP200O75643 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNRNP200O75643 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNRNP200O75643 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.87■■□□□ 1.09
SNRNP200O75643 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNRNP200O75643 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNRNP200O75643 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.87■■□□□ 1.09
SNRNP200O75643 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.86■■□□□ 1.09
SNRNP200O75643 C17orf82-201ENST00000623772 1530 ntBASIC21.86■■□□□ 1.09
SNRNP200O75643 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SNRNP200O75643 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.86■■□□□ 1.09
SNRNP200O75643 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP200O75643 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 AC110285.6-201ENST00000617652 491 ntBASIC21.85■■□□□ 1.09
SNRNP200O75643 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.85■■□□□ 1.09
SNRNP200O75643 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.85■■□□□ 1.09
SNRNP200O75643 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP200O75643 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SNRNP200O75643 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms