Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 AL161729.1-201ENST00000604104 1402 ntBASIC23.25■■□□□ 1.31
TBC1D3BA6NDS4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3BA6NDS4 C17orf82-201ENST00000623772 1530 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 MIR939-201ENST00000401314 82 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC105265.2-201ENST00000467189 838 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AP001330.3-201ENST00000520123 633 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC241377.3-202ENST00000626088 1088 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC241585.3-202ENST00000628937 1088 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 AC245100.8-202ENST00000629247 1058 ntBASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3BA6NDS4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3BA6NDS4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 AC091305.1-201ENST00000479476 895 ntBASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 AL138724.1-201ENST00000606771 1088 ntBASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3BA6NDS4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 RARRES2P6-201ENST00000567333 442 ntBASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 AC011298.3-201ENST00000615796 283 ntBASIC23.2■■□□□ 1.3
TBC1D3BA6NDS4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3BA6NDS4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.19■■□□□ 1.3
TBC1D3BA6NDS4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.19■■□□□ 1.3
TBC1D3BA6NDS4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.19■■□□□ 1.3
TBC1D3BA6NDS4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3BA6NDS4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3BA6NDS4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 AC022211.4-201ENST00000625094 2161 ntBASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3BA6NDS4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms