Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.66■■□□□ 1.86
RTN4Q9NQC3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L13-201ENST00000554103 1267 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L15-201ENST00000611059 1267 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L23-201ENST00000615195 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L24-201ENST00000617576 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L22-201ENST00000618238 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L20-201ENST00000619712 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L21-201ENST00000622058 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L10-201ENST00000622460 1267 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 DUX4L25-201ENST00000624915 1269 ntBASIC26.65■■□□□ 1.86
RTN4Q9NQC3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.65■■□□□ 1.86
RTN4Q9NQC3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RTN4Q9NQC3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.64■■□□□ 1.86
RTN4Q9NQC3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RTN4Q9NQC3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
RTN4Q9NQC3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RTN4Q9NQC3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.85
RTN4Q9NQC3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
RTN4Q9NQC3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTN4Q9NQC3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 MIR219A2-201ENST00000608502 1504 ntBASIC26.62■■□□□ 1.85
RTN4Q9NQC3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTN4Q9NQC3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 AC008813.1-201ENST00000536597 885 ntBASIC26.61■■□□□ 1.85
RTN4Q9NQC3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTN4Q9NQC3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 AC148477.6-201ENST00000623746 465 ntBASIC26.6■■□□□ 1.85
RTN4Q9NQC3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTN4Q9NQC3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.59■■□□□ 1.85
RTN4Q9NQC3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTN4Q9NQC3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTN4Q9NQC3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.56■■□□□ 1.84
RTN4Q9NQC3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RTN4Q9NQC3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms