Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD5Q8TDI0 AL117332.1-201ENST00000622628 974 ntBASIC23.39■■□□□ 1.33
CHD5Q8TDI0 TSPY9P-201ENST00000440215 945 ntBASIC23.38■■□□□ 1.33
CHD5Q8TDI0 TSPY11P-201ENST00000442607 1045 ntBASIC23.38■■□□□ 1.33
CHD5Q8TDI0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.38■■□□□ 1.33
CHD5Q8TDI0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD5Q8TDI0 AC004812.2-201ENST00000611079 2094 ntBASIC23.37■■□□□ 1.33
CHD5Q8TDI0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD5Q8TDI0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD5Q8TDI0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 MIR3621-201ENST00000580529 85 ntBASIC23.35■■□□□ 1.33
CHD5Q8TDI0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD5Q8TDI0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.34■■□□□ 1.33
CHD5Q8TDI0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.33■■□□□ 1.33
CHD5Q8TDI0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 AC005703.6-201ENST00000623265 1329 ntBASIC23.32■■□□□ 1.32
CHD5Q8TDI0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHD5Q8TDI0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 AC093323.1-202ENST00000635031 2045 ntBASIC23.31■■□□□ 1.32
CHD5Q8TDI0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.31■■□□□ 1.32
CHD5Q8TDI0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.3■■□□□ 1.32
CHD5Q8TDI0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD5Q8TDI0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 MIR4466-201ENST00000606121 54 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ALDH1A3-203ENST00000557963 1670 ntBASIC23.29■■□□□ 1.32
CHD5Q8TDI0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD5Q8TDI0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CHD5Q8TDI0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms