Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF38AQ8NAV1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF38AQ8NAV1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF38AQ8NAV1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF38AQ8NAV1 AC135279.3-201ENST00000610945 1311 ntBASIC26.52■■□□□ 1.84
PRPF38AQ8NAV1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 HLA-L-211ENST00000482052 1765 ntBASIC26.51■■□□□ 1.83
PRPF38AQ8NAV1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 DUX4L19-201ENST00000557448 1267 ntBASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF38AQ8NAV1 AL161729.1-201ENST00000604104 1402 ntBASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.49■■□□□ 1.83
PRPF38AQ8NAV1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.48■■□□□ 1.83
PRPF38AQ8NAV1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRPF38AQ8NAV1 AC024257.2-201ENST00000549699 147 ntBASIC26.48■■□□□ 1.83
PRPF38AQ8NAV1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.48■■□□□ 1.83
PRPF38AQ8NAV1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.48■■□□□ 1.83
PRPF38AQ8NAV1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 AC092171.4-201ENST00000609130 632 ntBASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRPF38AQ8NAV1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 SUDS3P1-201ENST00000505831 966 ntBASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 AL031432.3-201ENST00000607698 485 ntBASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 AC009102.2-201ENST00000606772 1639 ntBASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.46■■□□□ 1.83
PRPF38AQ8NAV1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PRPF38AQ8NAV1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PRPF38AQ8NAV1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 AC142381.2-201ENST00000566120 298 ntBASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.45■■□□□ 1.82
PRPF38AQ8NAV1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 EDA-201ENST00000338901 1233 ntBASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.44■■□□□ 1.82
PRPF38AQ8NAV1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.43■■□□□ 1.82
PRPF38AQ8NAV1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRPF38AQ8NAV1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
PRPF38AQ8NAV1 AC022211.4-201ENST00000625094 2161 ntBASIC26.43■■□□□ 1.82
PRPF38AQ8NAV1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRPF38AQ8NAV1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 AL355001.2-201ENST00000620617 1191 ntBASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PRPF38AQ8NAV1 SYT6-210ENST00000641643 1587 ntBASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PRPF38AQ8NAV1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms