Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC9CQ8N5M4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC9CQ8N5M4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TTC9CQ8N5M4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.02■□□□□ 0.48
TTC9CQ8N5M4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.02■□□□□ 0.48
TTC9CQ8N5M4 AC137630.3-201ENST00000607245 391 ntBASIC18.02■□□□□ 0.48
TTC9CQ8N5M4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TTC9CQ8N5M4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.01■□□□□ 0.47
TTC9CQ8N5M4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TTC9CQ8N5M4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18■□□□□ 0.47
TTC9CQ8N5M4 AC004448.1-201ENST00000458332 883 ntBASIC18■□□□□ 0.47
TTC9CQ8N5M4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18■□□□□ 0.47
TTC9CQ8N5M4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TTC9CQ8N5M4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18■□□□□ 0.47
TTC9CQ8N5M4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TTC9CQ8N5M4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TTC9CQ8N5M4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18■□□□□ 0.47
TTC9CQ8N5M4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC9CQ8N5M4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 ALDH1A3-203ENST00000557963 1670 ntBASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC9CQ8N5M4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC9CQ8N5M4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TTC9CQ8N5M4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TTC9CQ8N5M4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms