Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 HLA-L-211ENST00000482052 1765 ntBASIC16.77■□□□□ 0.28
APOC4P55056 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
APOC4P55056 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.77■□□□□ 0.28
APOC4P55056 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.77■□□□□ 0.28
APOC4P55056 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.77■□□□□ 0.28
APOC4P55056 AL512631.2-201ENST00000604634 923 ntBASIC16.77■□□□□ 0.28
APOC4P55056 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
APOC4P55056 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
APOC4P55056 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
APOC4P55056 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.76■□□□□ 0.27
APOC4P55056 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.76■□□□□ 0.27
APOC4P55056 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
APOC4P55056 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOC4P55056 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.75■□□□□ 0.27
APOC4P55056 AC142381.3-201ENST00000568208 1670 ntBASIC16.75■□□□□ 0.27
APOC4P55056 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.75■□□□□ 0.27
APOC4P55056 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.75■□□□□ 0.27
APOC4P55056 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.75■□□□□ 0.27
APOC4P55056 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.75■□□□□ 0.27
APOC4P55056 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
APOC4P55056 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.75■□□□□ 0.27
APOC4P55056 MIR4466-201ENST00000606121 54 ntBASIC16.75■□□□□ 0.27
APOC4P55056 AC092171.4-201ENST00000609130 632 ntBASIC16.75■□□□□ 0.27
APOC4P55056 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
APOC4P55056 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
APOC4P55056 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
APOC4P55056 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
APOC4P55056 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOC4P55056 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
APOC4P55056 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.74■□□□□ 0.27
APOC4P55056 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.74■□□□□ 0.27
APOC4P55056 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 AL139246.5-201ENST00000606645 996 ntBASIC16.74■□□□□ 0.27
APOC4P55056 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
APOC4P55056 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
APOC4P55056 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.73■□□□□ 0.27
APOC4P55056 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
APOC4P55056 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.73■□□□□ 0.27
APOC4P55056 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.73■□□□□ 0.27
APOC4P55056 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
APOC4P55056 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
APOC4P55056 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOC4P55056 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.72■□□□□ 0.27
APOC4P55056 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
APOC4P55056 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.72■□□□□ 0.27
APOC4P55056 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.72■□□□□ 0.27
APOC4P55056 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.72■□□□□ 0.27
APOC4P55056 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.72■□□□□ 0.27
APOC4P55056 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.72■□□□□ 0.27
APOC4P55056 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOC4P55056 AC019069.1-201ENST00000610008 1333 ntBASIC16.71■□□□□ 0.27
APOC4P55056 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.71■□□□□ 0.27
APOC4P55056 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
APOC4P55056 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOC4P55056 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms