Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 AC096631.2-201ENST00000436136 790 ntBASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL3P0C7X3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 AL512631.2-201ENST00000604634 923 ntBASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL3P0C7X3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNYL3P0C7X3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 AC110285.6-201ENST00000617652 491 ntBASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNYL3P0C7X3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCNYL3P0C7X3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNYL3P0C7X3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 AC005837.3-201ENST00000612163 286 ntBASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNYL3P0C7X3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 AC133561.4-201ENST00000566112 224 ntBASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNYL3P0C7X3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CCNYL3P0C7X3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNYL3P0C7X3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNYL3P0C7X3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 AC004448.1-201ENST00000458332 883 ntBASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 AL139125.2-201ENST00000623134 1869 ntBASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNYL3P0C7X3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCNYL3P0C7X3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNYL3P0C7X3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNYL3P0C7X3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNYL3P0C7X3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 504 ms