Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MIR5787-201ENST00000611784 55 ntBASIC30.84■■■□□ 2.53
LTN1O94822 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
LTN1O94822 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LTN1O94822 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LTN1O94822 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.83■■■□□ 2.53
LTN1O94822 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
LTN1O94822 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LTN1O94822 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
LTN1O94822 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
LTN1O94822 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.82■■■□□ 2.52
LTN1O94822 AC099791.1-201ENST00000416440 715 ntBASIC30.81■■■□□ 2.52
LTN1O94822 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.81■■■□□ 2.52
LTN1O94822 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LTN1O94822 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LTN1O94822 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LTN1O94822 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.8■■■□□ 2.52
LTN1O94822 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.8■■■□□ 2.52
LTN1O94822 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.8■■■□□ 2.52
LTN1O94822 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
LTN1O94822 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
LTN1O94822 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LTN1O94822 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.79■■■□□ 2.52
LTN1O94822 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.79■■■□□ 2.52
LTN1O94822 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 AL022069.1-201ENST00000568025 1636 ntBASIC30.79■■■□□ 2.52
LTN1O94822 AL138724.1-201ENST00000606771 1088 ntBASIC30.79■■■□□ 2.52
LTN1O94822 AC092171.4-201ENST00000609130 632 ntBASIC30.79■■■□□ 2.52
LTN1O94822 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTN1O94822 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
LTN1O94822 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LTN1O94822 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
LTN1O94822 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LTN1O94822 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.78■■■□□ 2.52
LTN1O94822 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LTN1O94822 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LTN1O94822 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
LTN1O94822 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.77■■■□□ 2.52
LTN1O94822 AC136469.2-201ENST00000623944 1028 ntBASIC30.77■■■□□ 2.52
LTN1O94822 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.77■■■□□ 2.52
LTN1O94822 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LTN1O94822 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.77■■■□□ 2.52
LTN1O94822 AC097381.1-201ENST00000429019 1296 ntBASIC30.77■■■□□ 2.52
LTN1O94822 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
LTN1O94822 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.77■■■□□ 2.52
LTN1O94822 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.77■■■□□ 2.52
LTN1O94822 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
LTN1O94822 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.76■■■□□ 2.51
LTN1O94822 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LTN1O94822 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LTN1O94822 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.76■■■□□ 2.51
LTN1O94822 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LTN1O94822 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.75■■■□□ 2.51
LTN1O94822 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LTN1O94822 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LTN1O94822 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
LTN1O94822 AC087623.3-201ENST00000607047 1098 ntBASIC30.75■■■□□ 2.51
LTN1O94822 MIR6821-201ENST00000617625 74 ntBASIC30.75■■■□□ 2.51
LTN1O94822 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LTN1O94822 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTN1O94822 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTN1O94822 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
LTN1O94822 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTN1O94822 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTN1O94822 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LTN1O94822 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.73■■■□□ 2.51
LTN1O94822 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
LTN1O94822 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.73■■■□□ 2.51
LTN1O94822 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LTN1O94822 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
LTN1O94822 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
LTN1O94822 AC092666.2-201ENST00000613287 246 ntBASIC30.72■■■□□ 2.51
LTN1O94822 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.72■■■□□ 2.51
LTN1O94822 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LTN1O94822 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
LTN1O94822 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.72■■■□□ 2.51
LTN1O94822 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 AC008764.7-201ENST00000593779 1081 ntBASIC30.71■■■□□ 2.51
LTN1O94822 AC241377.3-202ENST00000626088 1088 ntBASIC30.71■■■□□ 2.51
LTN1O94822 AC241585.3-202ENST00000628937 1088 ntBASIC30.71■■■□□ 2.51
LTN1O94822 AC245100.8-202ENST00000629247 1058 ntBASIC30.71■■■□□ 2.51
LTN1O94822 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.71■■■□□ 2.51
LTN1O94822 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
LTN1O94822 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.71■■■□□ 2.51
LTN1O94822 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.71■■■□□ 2.51
LTN1O94822 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTN1O94822 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.7■■■□□ 2.51
LTN1O94822 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTN1O94822 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.7■■■□□ 2.51
LTN1O94822 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
LTN1O94822 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
LTN1O94822 AC091060.1-201ENST00000623524 1766 ntBASIC30.7■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms