Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV23-1A0A0A0MS06 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV23-1A0A0A0MS06 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 KRT125P-201ENST00000546827 989 ntBASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV23-1A0A0A0MS06 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 AF131216.4-201ENST00000638924 1588 ntBASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 AL035685.1-201ENST00000636663 812 ntBASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 AL161729.1-201ENST00000604104 1402 ntBASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV23-1A0A0A0MS06 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV23-1A0A0A0MS06 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
TRBV23-1A0A0A0MS06 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV23-1A0A0A0MS06 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 RNF165-205ENST00000588679 2904 ntBASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV23-1A0A0A0MS06 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC021242.3-201ENST00000607598 1377 ntBASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 HLA-L-211ENST00000482052 1765 ntBASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRBV23-1A0A0A0MS06 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV23-1A0A0A0MS06 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV23-1A0A0A0MS06 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms