Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RCL1Q9Y2P8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RCL1Q9Y2P8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 ANOS2P-203ENST00000472227 1816 ntBASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RCL1Q9Y2P8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 C1orf229-201ENST00000623686 2258 ntBASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.71■□□□□ 0.59
RCL1Q9Y2P8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCL1Q9Y2P8 LINC00526-201ENST00000581067 1875 ntBASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RCL1Q9Y2P8 DUSP8P3-201ENST00000399571 1760 ntBASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCL1Q9Y2P8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RCL1Q9Y2P8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 GUSBP5-202ENST00000510805 1989 ntBASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCL1Q9Y2P8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 1299.1 ms