Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 AC026271.2-201ENST00000428091 497 ntBASIC30.33■■■□□ 2.45
SPG7Q9UQ90 MIR6089-201ENST00000616698 64 ntBASIC30.33■■■□□ 2.45
SPG7Q9UQ90 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SPG7Q9UQ90 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
SPG7Q9UQ90 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SPG7Q9UQ90 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.32■■■□□ 2.44
SPG7Q9UQ90 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.32■■■□□ 2.44
SPG7Q9UQ90 MIR939-201ENST00000401314 82 ntBASIC30.32■■■□□ 2.44
SPG7Q9UQ90 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.32■■■□□ 2.44
SPG7Q9UQ90 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 AC105265.2-201ENST00000467189 838 ntBASIC30.31■■■□□ 2.44
SPG7Q9UQ90 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SPG7Q9UQ90 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SPG7Q9UQ90 AP001330.3-201ENST00000520123 633 ntBASIC30.3■■■□□ 2.44
SPG7Q9UQ90 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
SPG7Q9UQ90 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.3■■■□□ 2.44
SPG7Q9UQ90 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC30.3■■■□□ 2.44
SPG7Q9UQ90 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
SPG7Q9UQ90 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SPG7Q9UQ90 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.28■■■□□ 2.44
SPG7Q9UQ90 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SPG7Q9UQ90 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 AL022069.1-201ENST00000568025 1636 ntBASIC30.27■■■□□ 2.44
SPG7Q9UQ90 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 MIR4767-201ENST00000582827 78 ntBASIC30.27■■■□□ 2.44
SPG7Q9UQ90 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SPG7Q9UQ90 SERBP1P1-201ENST00000396021 1160 ntBASIC30.26■■■□□ 2.43
SPG7Q9UQ90 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.26■■■□□ 2.43
SPG7Q9UQ90 AC099791.2-201ENST00000605725 427 ntBASIC30.26■■■□□ 2.43
SPG7Q9UQ90 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.26■■■□□ 2.43
SPG7Q9UQ90 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SPG7Q9UQ90 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SPG7Q9UQ90 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.25■■■□□ 2.43
SPG7Q9UQ90 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.25■■■□□ 2.43
SPG7Q9UQ90 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SPG7Q9UQ90 AC091305.1-201ENST00000479476 895 ntBASIC30.25■■■□□ 2.43
SPG7Q9UQ90 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SPG7Q9UQ90 DUSP8P4-201ENST00000399538 1761 ntBASIC30.25■■■□□ 2.43
SPG7Q9UQ90 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SPG7Q9UQ90 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SPG7Q9UQ90 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.24■■■□□ 2.43
SPG7Q9UQ90 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.24■■■□□ 2.43
SPG7Q9UQ90 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.24■■■□□ 2.43
SPG7Q9UQ90 AC009102.2-201ENST00000606772 1639 ntBASIC30.24■■■□□ 2.43
SPG7Q9UQ90 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SPG7Q9UQ90 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.23■■■□□ 2.43
SPG7Q9UQ90 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SPG7Q9UQ90 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
SPG7Q9UQ90 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.23■■■□□ 2.43
SPG7Q9UQ90 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SPG7Q9UQ90 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SPG7Q9UQ90 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SPG7Q9UQ90 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SPG7Q9UQ90 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.22■■■□□ 2.43
SPG7Q9UQ90 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.21■■■□□ 2.43
SPG7Q9UQ90 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SPG7Q9UQ90 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SPG7Q9UQ90 PTCHD3P2-201ENST00000424937 1205 ntBASIC30.2■■■□□ 2.43
SPG7Q9UQ90 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.2■■■□□ 2.43
SPG7Q9UQ90 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SPG7Q9UQ90 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.2■■■□□ 2.43
SPG7Q9UQ90 AL138724.1-201ENST00000606771 1088 ntBASIC30.2■■■□□ 2.43
SPG7Q9UQ90 AC092666.2-201ENST00000613287 246 ntBASIC30.2■■■□□ 2.43
SPG7Q9UQ90 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 MIR5787-201ENST00000611784 55 ntBASIC30.19■■■□□ 2.42
SPG7Q9UQ90 AC011298.3-201ENST00000615796 283 ntBASIC30.19■■■□□ 2.42
SPG7Q9UQ90 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SPG7Q9UQ90 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.18■■■□□ 2.42
SPG7Q9UQ90 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SPG7Q9UQ90 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.17■■■□□ 2.42
SPG7Q9UQ90 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC30.17■■■□□ 2.42
SPG7Q9UQ90 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.17■■■□□ 2.42
SPG7Q9UQ90 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms