Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF216Q9NWF9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
RNF216Q9NWF9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF216Q9NWF9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 AC010997.5-201ENST00000609182 354 ntBASIC25.75■■□□□ 1.71
RNF216Q9NWF9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RNF216Q9NWF9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 MTDHP2-201ENST00000601468 714 ntBASIC25.74■■□□□ 1.71
RNF216Q9NWF9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF216Q9NWF9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.73■■□□□ 1.71
RNF216Q9NWF9 MIR6724-1-201ENST00000616420 92 ntBASIC25.73■■□□□ 1.71
RNF216Q9NWF9 MIR6724-2-201ENST00000616483 92 ntBASIC25.73■■□□□ 1.71
RNF216Q9NWF9 MIR6724-4-201ENST00000617390 92 ntBASIC25.73■■□□□ 1.71
RNF216Q9NWF9 MIR6724-3-201ENST00000622482 92 ntBASIC25.73■■□□□ 1.71
RNF216Q9NWF9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF216Q9NWF9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF216Q9NWF9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF216Q9NWF9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF216Q9NWF9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF216Q9NWF9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF216Q9NWF9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
RNF216Q9NWF9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RNF216Q9NWF9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RNF216Q9NWF9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RNF216Q9NWF9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF216Q9NWF9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF216Q9NWF9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RNF216Q9NWF9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.69■■□□□ 1.7
RNF216Q9NWF9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF216Q9NWF9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.69■■□□□ 1.7
RNF216Q9NWF9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF216Q9NWF9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF216Q9NWF9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 AL356740.2-201ENST00000601559 647 ntBASIC25.68■■□□□ 1.7
RNF216Q9NWF9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF216Q9NWF9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF216Q9NWF9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF216Q9NWF9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms