Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.81■■□□□ 1.08
NANOGQ9H9S0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.81■■□□□ 1.08
NANOGQ9H9S0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NANOGQ9H9S0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 ANOS2P-203ENST00000472227 1816 ntBASIC21.8■■□□□ 1.08
NANOGQ9H9S0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NANOGQ9H9S0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NANOGQ9H9S0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NANOGQ9H9S0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NANOGQ9H9S0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NANOGQ9H9S0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NANOGQ9H9S0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.77■■□□□ 1.08
NANOGQ9H9S0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NANOGQ9H9S0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NANOGQ9H9S0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
NANOGQ9H9S0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 AC233723.2-201ENST00000623798 2106 ntBASIC21.76■■□□□ 1.07
NANOGQ9H9S0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NANOGQ9H9S0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NANOGQ9H9S0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NANOGQ9H9S0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 AC092068.2-201ENST00000590491 1708 ntBASIC21.73■■□□□ 1.07
NANOGQ9H9S0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
NANOGQ9H9S0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.72■■□□□ 1.07
NANOGQ9H9S0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NANOGQ9H9S0 AC090877.2-201ENST00000558441 1738 ntBASIC21.72■■□□□ 1.07
NANOGQ9H9S0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms