Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF407Q9C0G0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF407Q9C0G0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ZNF407Q9C0G0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF407Q9C0G0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.77■□□□□ 0.91
ZNF407Q9C0G0 MIR6089-201ENST00000616698 64 ntBASIC20.77■□□□□ 0.91
ZNF407Q9C0G0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF407Q9C0G0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF407Q9C0G0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF407Q9C0G0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
ZNF407Q9C0G0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 MIR935-201ENST00000401179 91 ntBASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 AC106739.1-201ENST00000617035 715 ntBASIC20.72■□□□□ 0.91
ZNF407Q9C0G0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF407Q9C0G0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 AC135731.1-201ENST00000569415 2548 ntBASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF407Q9C0G0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 AC133561.4-201ENST00000566112 224 ntBASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF407Q9C0G0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 AC005837.3-201ENST00000612163 286 ntBASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF407Q9C0G0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms