Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX18Q96RF0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SNX18Q96RF0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.77■□□□□ 0.92
SNX18Q96RF0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX18Q96RF0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.77■□□□□ 0.92
SNX18Q96RF0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX18Q96RF0 AC087393.1-201ENST00000582896 145 ntBASIC20.77■□□□□ 0.92
SNX18Q96RF0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX18Q96RF0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX18Q96RF0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SNX18Q96RF0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX18Q96RF0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
SNX18Q96RF0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.77■□□□□ 0.91
SNX18Q96RF0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SNX18Q96RF0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX18Q96RF0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.76■□□□□ 0.91
SNX18Q96RF0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SNX18Q96RF0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX18Q96RF0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX18Q96RF0 SPCS2P3-201ENST00000500401 656 ntBASIC20.75■□□□□ 0.91
SNX18Q96RF0 MIR6765-201ENST00000614092 87 ntBASIC20.75■□□□□ 0.91
SNX18Q96RF0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
SNX18Q96RF0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
SNX18Q96RF0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX18Q96RF0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SNX18Q96RF0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SNX18Q96RF0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX18Q96RF0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX18Q96RF0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX18Q96RF0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX18Q96RF0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX18Q96RF0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SNX18Q96RF0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX18Q96RF0 AL592295.1-201ENST00000400984 884 ntBASIC20.73■□□□□ 0.91
SNX18Q96RF0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.73■□□□□ 0.91
SNX18Q96RF0 AC129492.7-201ENST00000622992 756 ntBASIC20.73■□□□□ 0.91
SNX18Q96RF0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX18Q96RF0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNX18Q96RF0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX18Q96RF0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX18Q96RF0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SNX18Q96RF0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SNX18Q96RF0 AC004812.2-201ENST00000611079 2094 ntBASIC20.72■□□□□ 0.91
SNX18Q96RF0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNX18Q96RF0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX18Q96RF0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX18Q96RF0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNX18Q96RF0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNX18Q96RF0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX18Q96RF0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX18Q96RF0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX18Q96RF0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX18Q96RF0 DUX4L18-201ENST00000553347 1267 ntBASIC20.71■□□□□ 0.91
SNX18Q96RF0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX18Q96RF0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNX18Q96RF0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX18Q96RF0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms