Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SETD9Q8NE22 GUSBP5-202ENST00000510805 1989 ntBASIC21.06■□□□□ 0.96
SETD9Q8NE22 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SETD9Q8NE22 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SETD9Q8NE22 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SETD9Q8NE22 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SETD9Q8NE22 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SETD9Q8NE22 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SETD9Q8NE22 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.06■□□□□ 0.96
SETD9Q8NE22 C1orf229-201ENST00000623686 2258 ntBASIC21.06■□□□□ 0.96
SETD9Q8NE22 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
SETD9Q8NE22 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SETD9Q8NE22 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SETD9Q8NE22 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SETD9Q8NE22 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SETD9Q8NE22 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.05■□□□□ 0.96
SETD9Q8NE22 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SETD9Q8NE22 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SETD9Q8NE22 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.04■□□□□ 0.96
SETD9Q8NE22 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SETD9Q8NE22 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
SETD9Q8NE22 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SETD9Q8NE22 ECEL1P1-201ENST00000373592 1742 ntBASIC21.04■□□□□ 0.96
SETD9Q8NE22 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SETD9Q8NE22 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SETD9Q8NE22 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SETD9Q8NE22 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SETD9Q8NE22 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SETD9Q8NE22 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SETD9Q8NE22 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SETD9Q8NE22 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SETD9Q8NE22 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SETD9Q8NE22 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SETD9Q8NE22 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21■□□□□ 0.95
SETD9Q8NE22 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21■□□□□ 0.95
SETD9Q8NE22 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21■□□□□ 0.95
SETD9Q8NE22 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21■□□□□ 0.95
SETD9Q8NE22 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SETD9Q8NE22 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21■□□□□ 0.95
SETD9Q8NE22 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SETD9Q8NE22 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SETD9Q8NE22 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SETD9Q8NE22 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.99■□□□□ 0.95
SETD9Q8NE22 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SETD9Q8NE22 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SETD9Q8NE22 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SETD9Q8NE22 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SETD9Q8NE22 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.98■□□□□ 0.95
SETD9Q8NE22 MIR3960-201ENST00000583311 91 ntBASIC20.98■□□□□ 0.95
SETD9Q8NE22 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.98■□□□□ 0.95
SETD9Q8NE22 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms