Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RBFAQ8N0V3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.05■■□□□ 1.28
RBFAQ8N0V3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RBFAQ8N0V3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.03■■□□□ 1.28
RBFAQ8N0V3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RBFAQ8N0V3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 AC141586.4-201ENST00000624558 1573 ntBASIC23.02■■□□□ 1.28
RBFAQ8N0V3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 LINC00543-201ENST00000567234 1845 ntBASIC23.02■■□□□ 1.28
RBFAQ8N0V3 AC019069.1-201ENST00000610008 1333 ntBASIC23.02■■□□□ 1.28
RBFAQ8N0V3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RBFAQ8N0V3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RBFAQ8N0V3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23■■□□□ 1.27
RBFAQ8N0V3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23■■□□□ 1.27
RBFAQ8N0V3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RBFAQ8N0V3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RBFAQ8N0V3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23■■□□□ 1.27
RBFAQ8N0V3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23■■□□□ 1.27
RBFAQ8N0V3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23■■□□□ 1.27
RBFAQ8N0V3 AC131281.2-201ENST00000520478 145 ntBASIC23■■□□□ 1.27
RBFAQ8N0V3 AL117332.1-201ENST00000622628 974 ntBASIC23■■□□□ 1.27
RBFAQ8N0V3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RBFAQ8N0V3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 MIR6724-1-201ENST00000616420 92 ntBASIC22.99■■□□□ 1.27
RBFAQ8N0V3 MIR6724-2-201ENST00000616483 92 ntBASIC22.99■■□□□ 1.27
RBFAQ8N0V3 MIR6724-4-201ENST00000617390 92 ntBASIC22.99■■□□□ 1.27
RBFAQ8N0V3 MIR6724-3-201ENST00000622482 92 ntBASIC22.99■■□□□ 1.27
RBFAQ8N0V3 AC093323.1-202ENST00000635031 2045 ntBASIC22.99■■□□□ 1.27
RBFAQ8N0V3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RBFAQ8N0V3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.98■■□□□ 1.27
RBFAQ8N0V3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.98■■□□□ 1.27
RBFAQ8N0V3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.98■■□□□ 1.27
RBFAQ8N0V3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RBFAQ8N0V3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.96■■□□□ 1.27
RBFAQ8N0V3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms