Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFX6Q8HWS3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.85■■□□□ 1.41
RFX6Q8HWS3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
RFX6Q8HWS3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.84■■□□□ 1.41
RFX6Q8HWS3 AL033527.3-201ENST00000566366 1196 ntBASIC23.84■■□□□ 1.41
RFX6Q8HWS3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.84■■□□□ 1.41
RFX6Q8HWS3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.84■■□□□ 1.41
RFX6Q8HWS3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RFX6Q8HWS3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFX6Q8HWS3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFX6Q8HWS3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFX6Q8HWS3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.83■■□□□ 1.41
RFX6Q8HWS3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.83■■□□□ 1.4
RFX6Q8HWS3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFX6Q8HWS3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 AC120024.1-201ENST00000562672 995 ntBASIC23.82■■□□□ 1.4
RFX6Q8HWS3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RFX6Q8HWS3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFX6Q8HWS3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 AL161729.1-201ENST00000604104 1402 ntBASIC23.8■■□□□ 1.4
RFX6Q8HWS3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.8■■□□□ 1.4
RFX6Q8HWS3 AL022069.1-201ENST00000568025 1636 ntBASIC23.8■■□□□ 1.4
RFX6Q8HWS3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.79■■□□□ 1.4
RFX6Q8HWS3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX6Q8HWS3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 THA1P-201ENST00000590384 1145 ntBASIC23.77■■□□□ 1.4
RFX6Q8HWS3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX6Q8HWS3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFX6Q8HWS3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms