Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC6A12P48065 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC6A12P48065 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC6A12P48065 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC6A12P48065 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC6A12P48065 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.29■■□□□ 1.16
SLC6A12P48065 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC6A12P48065 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC6A12P48065 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC6A12P48065 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC6A12P48065 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
SLC6A12P48065 YBX1P4-201ENST00000392794 808 ntBASIC22.28■■□□□ 1.16
SLC6A12P48065 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SLC6A12P48065 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC6A12P48065 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC6A12P48065 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.27■■□□□ 1.16
SLC6A12P48065 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC6A12P48065 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC6A12P48065 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC6A12P48065 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SLC6A12P48065 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC6A12P48065 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SLC6A12P48065 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SLC6A12P48065 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.26■■□□□ 1.15
SLC6A12P48065 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC6A12P48065 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC6A12P48065 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SLC6A12P48065 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.25■■□□□ 1.15
SLC6A12P48065 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC6A12P48065 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC6A12P48065 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A12P48065 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC6A12P48065 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC6A12P48065 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A12P48065 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SLC6A12P48065 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
SLC6A12P48065 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC6A12P48065 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.24■■□□□ 1.15
SLC6A12P48065 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC6A12P48065 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC6A12P48065 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
SLC6A12P48065 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLC6A12P48065 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SLC6A12P48065 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A12P48065 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
SLC6A12P48065 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC6A12P48065 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SLC6A12P48065 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.22■■□□□ 1.15
SLC6A12P48065 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.22■■□□□ 1.15
SLC6A12P48065 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC6A12P48065 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A12P48065 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SLC6A12P48065 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A12P48065 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A12P48065 AL031848.2-201ENST00000607670 837 ntBASIC22.21■■□□□ 1.15
SLC6A12P48065 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC6A12P48065 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC6A12P48065 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.21■■□□□ 1.15
SLC6A12P48065 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.21■■□□□ 1.15
SLC6A12P48065 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SLC6A12P48065 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SLC6A12P48065 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SLC6A12P48065 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.2■■□□□ 1.14
SLC6A12P48065 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.2■■□□□ 1.14
SLC6A12P48065 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC6A12P48065 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC6A12P48065 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SLC6A12P48065 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.19■■□□□ 1.14
SLC6A12P48065 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC6A12P48065 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC6A12P48065 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC6A12P48065 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.18■■□□□ 1.14
SLC6A12P48065 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
SLC6A12P48065 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SLC6A12P48065 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms