Protein–RNA interactions for Protein: P08779

KRT16, Keratin, type I cytoskeletal 16, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P08779 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.64■■□□□ 1.22
KRT16P08779 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT16P08779 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT16P08779 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
KRT16P08779 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
KRT16P08779 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT16P08779 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT16P08779 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT16P08779 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT16P08779 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT16P08779 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT16P08779 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT16P08779 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KRT16P08779 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.63■■□□□ 1.21
KRT16P08779 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.63■■□□□ 1.21
KRT16P08779 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT16P08779 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRT16P08779 AC060814.1-201ENST00000554326 538 ntBASIC22.63■■□□□ 1.21
KRT16P08779 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT16P08779 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KRT16P08779 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT16P08779 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.63■■□□□ 1.21
KRT16P08779 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT16P08779 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
KRT16P08779 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
KRT16P08779 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.62■■□□□ 1.21
KRT16P08779 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT16P08779 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT16P08779 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT16P08779 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.62■■□□□ 1.21
KRT16P08779 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.62■■□□□ 1.21
KRT16P08779 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
KRT16P08779 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
KRT16P08779 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT16P08779 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT16P08779 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT16P08779 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT16P08779 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT16P08779 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT16P08779 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT16P08779 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
KRT16P08779 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.6■■□□□ 1.21
KRT16P08779 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT16P08779 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
KRT16P08779 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.6■■□□□ 1.21
KRT16P08779 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT16P08779 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT16P08779 AL157400.5-201ENST00000507624 621 ntBASIC22.59■■□□□ 1.21
KRT16P08779 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.59■■□□□ 1.21
KRT16P08779 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT16P08779 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT16P08779 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
KRT16P08779 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT16P08779 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT16P08779 SLC25A24-204ENST00000569674 2357 ntBASIC22.58■■□□□ 1.21
KRT16P08779 AC127496.7-201ENST00000625110 1798 ntBASIC22.58■■□□□ 1.21
KRT16P08779 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
KRT16P08779 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
KRT16P08779 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.58■■□□□ 1.21
KRT16P08779 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT16P08779 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.58■■□□□ 1.21
KRT16P08779 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT16P08779 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KRT16P08779 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
KRT16P08779 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.57■■□□□ 1.2
KRT16P08779 MIR4449-201ENST00000578365 66 ntBASIC22.57■■□□□ 1.2
KRT16P08779 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.57■■□□□ 1.2
KRT16P08779 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT16P08779 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
KRT16P08779 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT16P08779 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.56■■□□□ 1.2
KRT16P08779 GUSBP5-202ENST00000510805 1989 ntBASIC22.56■■□□□ 1.2
KRT16P08779 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT16P08779 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
KRT16P08779 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT16P08779 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
KRT16P08779 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT16P08779 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
KRT16P08779 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT16P08779 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT16P08779 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.56■■□□□ 1.2
KRT16P08779 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT16P08779 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms