Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF13O75888 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TNFSF13O75888 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF13O75888 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF13O75888 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF13O75888 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF13O75888 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF13O75888 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF13O75888 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF13O75888 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF13O75888 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF13O75888 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF13O75888 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFSF13O75888 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF13O75888 AC110285.6-201ENST00000617652 491 ntBASIC20.33■□□□□ 0.85
TNFSF13O75888 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.33■□□□□ 0.84
TNFSF13O75888 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFSF13O75888 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF13O75888 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF13O75888 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF13O75888 AC096631.2-201ENST00000436136 790 ntBASIC20.32■□□□□ 0.84
TNFSF13O75888 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFSF13O75888 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.32■□□□□ 0.84
TNFSF13O75888 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF13O75888 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFSF13O75888 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF13O75888 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF13O75888 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFSF13O75888 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFSF13O75888 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF13O75888 HLA-L-211ENST00000482052 1765 ntBASIC20.31■□□□□ 0.84
TNFSF13O75888 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF13O75888 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF13O75888 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF13O75888 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNFSF13O75888 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF13O75888 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFSF13O75888 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 AC022211.4-201ENST00000625094 2161 ntBASIC20.29■□□□□ 0.84
TNFSF13O75888 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TNFSF13O75888 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFSF13O75888 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFSF13O75888 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFSF13O75888 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF13O75888 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF13O75888 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNFSF13O75888 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
TNFSF13O75888 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFSF13O75888 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF13O75888 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNFSF13O75888 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TNFSF13O75888 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF13O75888 SRD5A1P1-201ENST00000442297 786 ntBASIC20.27■□□□□ 0.84
TNFSF13O75888 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF13O75888 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF13O75888 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF13O75888 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNFSF13O75888 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.27■□□□□ 0.83
TNFSF13O75888 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNFSF13O75888 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF13O75888 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF13O75888 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF13O75888 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFSF13O75888 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF13O75888 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFSF13O75888 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TNFSF13O75888 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF13O75888 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TNFSF13O75888 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF13O75888 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF13O75888 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF13O75888 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF13O75888 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF13O75888 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
TNFSF13O75888 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNFSF13O75888 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms