Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV4S1A1TA0A5B7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 AC137630.3-201ENST00000607245 391 ntBASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MIR6089-201ENST00000616698 64 ntBASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TCRBV4S1A1TA0A5B7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TSPY9P-201ENST00000440215 945 ntBASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TSPY11P-201ENST00000442607 1045 ntBASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MIR4281-201ENST00000580852 62 ntBASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV4S1A1TA0A5B7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 KRT16P3-201ENST00000439127 1283 ntBASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 AC011551.1-201ENST00000614101 683 ntBASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV4S1A1TA0A5B7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV4S1A1TA0A5B7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 AC021242.3-201ENST00000607598 1377 ntBASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV4S1A1TA0A5B7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms