Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.78■□□□□ 0.6
SAA2-SAA4A0A096LPE2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA2-SAA4A0A096LPE2 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.78■□□□□ 0.6
SAA2-SAA4A0A096LPE2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AL033527.3-201ENST00000566366 1196 ntBASIC18.77■□□□□ 0.6
SAA2-SAA4A0A096LPE2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AL161729.1-201ENST00000604104 1402 ntBASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AC120024.1-201ENST00000562672 995 ntBASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SAA2-SAA4A0A096LPE2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AL022069.1-201ENST00000568025 1636 ntBASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 THA1P-201ENST00000590384 1145 ntBASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.73■□□□□ 0.59
SAA2-SAA4A0A096LPE2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SAA2-SAA4A0A096LPE2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SAA2-SAA4A0A096LPE2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KRT18P24-201ENST00000344739 1156 ntBASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms