Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 AL121749.1-202ENST00000609313 2153 ntBASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHAC2Q9Y5I4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHAC2Q9Y5I4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
PCDHAC2Q9Y5I4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHAC2Q9Y5I4 AC131274.2-201ENST00000580697 1507 ntBASIC27.81■■■□□ 2.04
PCDHAC2Q9Y5I4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 AL136967.2-201ENST00000623968 743 ntBASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHAC2Q9Y5I4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHAC2Q9Y5I4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.79■■■□□ 2.04
PCDHAC2Q9Y5I4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.79■■■□□ 2.04
PCDHAC2Q9Y5I4 AL355001.2-201ENST00000620617 1191 ntBASIC27.79■■■□□ 2.04
PCDHAC2Q9Y5I4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHAC2Q9Y5I4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 EDA-201ENST00000338901 1233 ntBASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 AF213884.3-201ENST00000563833 479 ntBASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 AC092666.2-201ENST00000613287 246 ntBASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.78■■■□□ 2.04
PCDHAC2Q9Y5I4 SLC6A10P-202ENST00000431994 2058 ntBASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 AC105265.2-201ENST00000467189 838 ntBASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
PCDHAC2Q9Y5I4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
PCDHAC2Q9Y5I4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.76■■■□□ 2.03
PCDHAC2Q9Y5I4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.76■■■□□ 2.03
PCDHAC2Q9Y5I4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
PCDHAC2Q9Y5I4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHAC2Q9Y5I4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHAC2Q9Y5I4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHAC2Q9Y5I4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.75■■■□□ 2.03
PCDHAC2Q9Y5I4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHAC2Q9Y5I4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHAC2Q9Y5I4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHAC2Q9Y5I4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 AC005703.6-201ENST00000623265 1329 ntBASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 AP001330.3-201ENST00000520123 633 ntBASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHAC2Q9Y5I4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHAC2Q9Y5I4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHAC2Q9Y5I4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.73■■■□□ 2.03
PCDHAC2Q9Y5I4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
PCDHAC2Q9Y5I4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 MIR939-201ENST00000401314 82 ntBASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHAC2Q9Y5I4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHAC2Q9Y5I4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHAC2Q9Y5I4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHAC2Q9Y5I4 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.7■■■□□ 2.02
PCDHAC2Q9Y5I4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHAC2Q9Y5I4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHAC2Q9Y5I4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
PCDHAC2Q9Y5I4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHAC2Q9Y5I4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 MIR4767-201ENST00000582827 78 ntBASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHAC2Q9Y5I4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 SERBP1P1-201ENST00000396021 1160 ntBASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHAC2Q9Y5I4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHAC2Q9Y5I4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHAC2Q9Y5I4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms