Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 AL031848.2-201ENST00000607670 837 ntBASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGC3Q9UN70 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC3Q9UN70 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 AC131274.2-201ENST00000580697 1507 ntBASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHGC3Q9UN70 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC3Q9UN70 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDHGC3Q9UN70 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDHGC3Q9UN70 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 AL022069.1-201ENST00000568025 1636 ntBASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHGC3Q9UN70 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 RARRES2P1-201ENST00000474487 481 ntBASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC3Q9UN70 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 AC137630.3-201ENST00000607245 391 ntBASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PCDHGC3Q9UN70 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC3Q9UN70 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHGC3Q9UN70 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC3Q9UN70 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PCDHGC3Q9UN70 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC3Q9UN70 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC3Q9UN70 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGC3Q9UN70 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHGC3Q9UN70 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHGC3Q9UN70 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHGC3Q9UN70 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PCDHGC3Q9UN70 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC3Q9UN70 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC3Q9UN70 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGC3Q9UN70 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHGC3Q9UN70 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHGC3Q9UN70 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms