Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM39Q9HCM9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.89■■□□□ 1.25
TRIM39Q9HCM9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.89■■□□□ 1.25
TRIM39Q9HCM9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM39Q9HCM9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM39Q9HCM9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM39Q9HCM9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM39Q9HCM9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 HLA-L-211ENST00000482052 1765 ntBASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 UNC93B8-201ENST00000511903 705 ntBASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM39Q9HCM9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 TSPY9P-201ENST00000440215 945 ntBASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 TSPY11P-201ENST00000442607 1045 ntBASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM39Q9HCM9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM39Q9HCM9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 SNX5-217ENST00000606557 1087 ntBASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.83■■□□□ 1.25
TRIM39Q9HCM9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM39Q9HCM9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM39Q9HCM9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 AL356441.2-201ENST00000443009 864 ntBASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 AC004448.1-201ENST00000458332 883 ntBASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 AC131274.2-201ENST00000580697 1507 ntBASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.81■■□□□ 1.24
TRIM39Q9HCM9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 AC010997.5-201ENST00000609182 354 ntBASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM39Q9HCM9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.79■■□□□ 1.24
TRIM39Q9HCM9 AL022069.1-201ENST00000568025 1636 ntBASIC22.79■■□□□ 1.24
TRIM39Q9HCM9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM39Q9HCM9 KRT16P3-201ENST00000439127 1283 ntBASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 475.6 ms