Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHAC1Q9H158 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PCDHAC1Q9H158 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHAC1Q9H158 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHAC1Q9H158 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.95■■□□□ 1.11
PCDHAC1Q9H158 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 MIR7108-201ENST00000614319 87 ntBASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 LINC00565-201ENST00000562710 2331 ntBASIC21.95■■□□□ 1.1
PCDHAC1Q9H158 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 MIR639-201ENST00000384974 98 ntBASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 AC092296.2-201ENST00000589470 999 ntBASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHAC1Q9H158 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC1Q9H158 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC1Q9H158 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHAC1Q9H158 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHAC1Q9H158 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHAC1Q9H158 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 MIR3960-201ENST00000583311 91 ntBASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHAC1Q9H158 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHAC1Q9H158 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHAC1Q9H158 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHAC1Q9H158 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHAC1Q9H158 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDHAC1Q9H158 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHAC1Q9H158 SMPD5-203ENST00000639008 1464 ntBASIC21.89■■□□□ 1.09
PCDHAC1Q9H158 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHAC1Q9H158 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHAC1Q9H158 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms