Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH15Q96QU1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 AC091305.1-201ENST00000479476 895 ntBASIC22.8■■□□□ 1.24
PCDH15Q96QU1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 MIR4767-201ENST00000582827 78 ntBASIC22.8■■□□□ 1.24
PCDH15Q96QU1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH15Q96QU1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.8■■□□□ 1.24
PCDH15Q96QU1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 AL162430.1-201ENST00000480705 870 ntBASIC22.79■■□□□ 1.24
PCDH15Q96QU1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDH15Q96QU1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 AC097639.1-201ENST00000565519 1891 ntBASIC22.78■■□□□ 1.24
PCDH15Q96QU1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH15Q96QU1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 AC005703.6-201ENST00000623265 1329 ntBASIC22.77■■□□□ 1.24
PCDH15Q96QU1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 CA15P2-201ENST00000611168 834 ntBASIC22.77■■□□□ 1.24
PCDH15Q96QU1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH15Q96QU1 RASA4CP-201ENST00000424092 1398 ntBASIC22.77■■□□□ 1.23
PCDH15Q96QU1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.76■■□□□ 1.23
PCDH15Q96QU1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDH15Q96QU1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH15Q96QU1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 SYT6-210ENST00000641643 1587 ntBASIC22.74■■□□□ 1.23
PCDH15Q96QU1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
PCDH15Q96QU1 AC027682.1-201ENST00000562846 899 ntBASIC22.74■■□□□ 1.23
PCDH15Q96QU1 AC011298.3-201ENST00000615796 283 ntBASIC22.74■■□□□ 1.23
PCDH15Q96QU1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PCDH15Q96QU1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH15Q96QU1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH15Q96QU1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH15Q96QU1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH15Q96QU1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH15Q96QU1 AC131274.2-201ENST00000580697 1507 ntBASIC22.72■■□□□ 1.23
PCDH15Q96QU1 AC010501.1-201ENST00000606270 1962 ntBASIC22.72■■□□□ 1.23
PCDH15Q96QU1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH15Q96QU1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH15Q96QU1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
PCDH15Q96QU1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms