Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 AC099791.1-201ENST00000416440 715 ntBASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 AC008764.7-201ENST00000593779 1081 ntBASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSMD1Q96PZ7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 AC104771.1-201ENST00000603335 964 ntBASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CSMD1Q96PZ7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CSMD1Q96PZ7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 DUX4L19-201ENST00000557448 1267 ntBASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.85■□□□□ 0.77
CSMD1Q96PZ7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 AC011298.3-201ENST00000615796 283 ntBASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSMD1Q96PZ7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSMD1Q96PZ7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CSMD1Q96PZ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSMD1Q96PZ7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CSMD1Q96PZ7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.83■□□□□ 0.77
CSMD1Q96PZ7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.83■□□□□ 0.76
CSMD1Q96PZ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.83■□□□□ 0.76
CSMD1Q96PZ7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSMD1Q96PZ7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSMD1Q96PZ7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSMD1Q96PZ7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.82■□□□□ 0.76
CSMD1Q96PZ7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.81■□□□□ 0.76
CSMD1Q96PZ7 AC233992.3-201ENST00000607491 485 ntBASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.8■□□□□ 0.76
CSMD1Q96PZ7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms