Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 DUX4L19-201ENST00000557448 1267 ntBASIC18.15■□□□□ 0.5
LINC01006Q8NI28 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01006Q8NI28 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01006Q8NI28 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 AC092171.4-201ENST00000609130 632 ntBASIC18.12■□□□□ 0.49
LINC01006Q8NI28 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01006Q8NI28 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.11■□□□□ 0.49
LINC01006Q8NI28 AL136967.2-201ENST00000623968 743 ntBASIC18.11■□□□□ 0.49
LINC01006Q8NI28 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01006Q8NI28 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 SYT6-210ENST00000641643 1587 ntBASIC18.1■□□□□ 0.49
LINC01006Q8NI28 AC131274.2-201ENST00000580697 1507 ntBASIC18.1■□□□□ 0.49
LINC01006Q8NI28 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC01006Q8NI28 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 AC026271.2-201ENST00000428091 497 ntBASIC18.09■□□□□ 0.49
LINC01006Q8NI28 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 AF213884.3-201ENST00000563833 479 ntBASIC18.09■□□□□ 0.49
LINC01006Q8NI28 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01006Q8NI28 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01006Q8NI28 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01006Q8NI28 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01006Q8NI28 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01006Q8NI28 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC01006Q8NI28 AC105265.2-201ENST00000467189 838 ntBASIC18.08■□□□□ 0.48
LINC01006Q8NI28 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
LINC01006Q8NI28 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01006Q8NI28 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01006Q8NI28 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms