Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LIMS2Q7Z4I7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LIMS2Q7Z4I7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 AC010997.5-201ENST00000609182 354 ntBASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LIMS2Q7Z4I7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 KRT16P3-201ENST00000439127 1283 ntBASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LIMS2Q7Z4I7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.64■■□□□ 1.54
LIMS2Q7Z4I7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LIMS2Q7Z4I7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LIMS2Q7Z4I7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.62■■□□□ 1.53
LIMS2Q7Z4I7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 MTDHP2-201ENST00000601468 714 ntBASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 AL161729.1-201ENST00000604104 1402 ntBASIC24.61■■□□□ 1.53
LIMS2Q7Z4I7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 MIR6724-1-201ENST00000616420 92 ntBASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 MIR6724-2-201ENST00000616483 92 ntBASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 MIR6724-4-201ENST00000617390 92 ntBASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 MIR6724-3-201ENST00000622482 92 ntBASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LIMS2Q7Z4I7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 AL022069.1-201ENST00000568025 1636 ntBASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LIMS2Q7Z4I7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.58■■□□□ 1.53
LIMS2Q7Z4I7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LIMS2Q7Z4I7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
LIMS2Q7Z4I7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LIMS2Q7Z4I7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.55■■□□□ 1.52
LIMS2Q7Z4I7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.55■■□□□ 1.52
LIMS2Q7Z4I7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
LIMS2Q7Z4I7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms