Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KRTCAP3Q53RY4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 SUDS3P1-201ENST00000505831 966 ntBASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRTCAP3Q53RY4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KRTCAP3Q53RY4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 AC024257.2-201ENST00000549699 147 ntBASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRTCAP3Q53RY4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 AL031432.3-201ENST00000607698 485 ntBASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRTCAP3Q53RY4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRTCAP3Q53RY4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRTCAP3Q53RY4 SYT6-210ENST00000641643 1587 ntBASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 AC131274.2-201ENST00000580697 1507 ntBASIC20.72■□□□□ 0.91
KRTCAP3Q53RY4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 AL022069.1-201ENST00000568025 1636 ntBASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRTCAP3Q53RY4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 AL121749.1-202ENST00000609313 2153 ntBASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRTCAP3Q53RY4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms