Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM11AP58511 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM11AP58511 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SMIM11AP58511 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM11AP58511 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM11AP58511 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.23■□□□□ 0.99
SMIM11AP58511 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM11AP58511 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMIM11AP58511 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.22■□□□□ 0.99
SMIM11AP58511 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM11AP58511 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.22■□□□□ 0.99
SMIM11AP58511 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM11AP58511 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM11AP58511 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.22■□□□□ 0.99
SMIM11AP58511 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM11AP58511 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM11AP58511 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM11AP58511 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM11AP58511 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM11AP58511 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.21■□□□□ 0.99
SMIM11AP58511 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM11AP58511 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SMIM11AP58511 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM11AP58511 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM11AP58511 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM11AP58511 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMIM11AP58511 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM11AP58511 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM11AP58511 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMIM11AP58511 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMIM11AP58511 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM11AP58511 AL161729.1-201ENST00000604104 1402 ntBASIC21.2■□□□□ 0.98
SMIM11AP58511 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM11AP58511 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM11AP58511 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM11AP58511 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMIM11AP58511 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM11AP58511 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM11AP58511 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMIM11AP58511 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM11AP58511 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.18■□□□□ 0.98
SMIM11AP58511 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMIM11AP58511 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM11AP58511 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM11AP58511 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM11AP58511 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 AC079834.2-201ENST00000609776 1949 ntBASIC21.17■□□□□ 0.98
SMIM11AP58511 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM11AP58511 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.16■□□□□ 0.98
SMIM11AP58511 GPX1-201ENST00000419349 1106 ntBASIC21.16■□□□□ 0.98
SMIM11AP58511 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.16■□□□□ 0.98
SMIM11AP58511 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.16■□□□□ 0.98
SMIM11AP58511 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM11AP58511 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM11AP58511 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM11AP58511 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SMIM11AP58511 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM11AP58511 AC090877.2-201ENST00000558441 1738 ntBASIC21.15■□□□□ 0.98
SMIM11AP58511 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM11AP58511 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.14■□□□□ 0.98
SMIM11AP58511 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM11AP58511 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM11AP58511 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
SMIM11AP58511 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
SMIM11AP58511 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.14■□□□□ 0.97
SMIM11AP58511 AC133552.2-201ENST00000619106 1032 ntBASIC21.14■□□□□ 0.97
SMIM11AP58511 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM11AP58511 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms