Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MECP2P51608 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MECP2P51608 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MECP2P51608 LINC01971-201ENST00000617888 1048 ntBASIC19.63■□□□□ 0.73
MECP2P51608 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MECP2P51608 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MECP2P51608 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MECP2P51608 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.63■□□□□ 0.73
MECP2P51608 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MECP2P51608 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MECP2P51608 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MECP2P51608 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
MECP2P51608 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.62■□□□□ 0.73
MECP2P51608 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.62■□□□□ 0.73
MECP2P51608 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MECP2P51608 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.62■□□□□ 0.73
MECP2P51608 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
MECP2P51608 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.61■□□□□ 0.73
MECP2P51608 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.61■□□□□ 0.73
MECP2P51608 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MECP2P51608 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.6■□□□□ 0.73
MECP2P51608 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MECP2P51608 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MECP2P51608 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MECP2P51608 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MECP2P51608 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MECP2P51608 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
MECP2P51608 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.59■□□□□ 0.73
MECP2P51608 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MECP2P51608 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MECP2P51608 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.59■□□□□ 0.73
MECP2P51608 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.59■□□□□ 0.73
MECP2P51608 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MECP2P51608 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MECP2P51608 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MECP2P51608 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MECP2P51608 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MECP2P51608 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MECP2P51608 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MECP2P51608 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MECP2P51608 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MECP2P51608 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MECP2P51608 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 DUX4L11-201ENST00000611504 1267 ntBASIC19.57■□□□□ 0.72
MECP2P51608 DUX4L12-201ENST00000614593 1267 ntBASIC19.57■□□□□ 0.72
MECP2P51608 DUX4L14-201ENST00000621227 1267 ntBASIC19.57■□□□□ 0.72
MECP2P51608 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 AL359504.2-201ENST00000605506 1601 ntBASIC19.57■□□□□ 0.72
MECP2P51608 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MECP2P51608 ECEL1P1-201ENST00000373592 1742 ntBASIC19.56■□□□□ 0.72
MECP2P51608 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MECP2P51608 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MECP2P51608 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.56■□□□□ 0.72
MECP2P51608 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MECP2P51608 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MECP2P51608 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.55■□□□□ 0.72
MECP2P51608 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MECP2P51608 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MECP2P51608 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MECP2P51608 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MECP2P51608 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MECP2P51608 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MECP2P51608 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.55■□□□□ 0.72
MECP2P51608 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MECP2P51608 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MECP2P51608 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms