Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT4O95628 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNOT4O95628 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.44■□□□□ 0.86
CNOT4O95628 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CNOT4O95628 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT4O95628 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CNOT4O95628 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT4O95628 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT4O95628 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT4O95628 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT4O95628 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CNOT4O95628 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT4O95628 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.43■□□□□ 0.86
CNOT4O95628 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNOT4O95628 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CNOT4O95628 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT4O95628 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT4O95628 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.42■□□□□ 0.86
CNOT4O95628 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.42■□□□□ 0.86
CNOT4O95628 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 UNC93B8-201ENST00000511903 705 ntBASIC20.41■□□□□ 0.86
CNOT4O95628 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT4O95628 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT4O95628 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT4O95628 AP003733.4-201ENST00000623785 1697 ntBASIC20.41■□□□□ 0.86
CNOT4O95628 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNOT4O95628 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT4O95628 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT4O95628 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT4O95628 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT4O95628 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CNOT4O95628 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT4O95628 MIR6722-201ENST00000617286 78 ntBASIC20.4■□□□□ 0.86
CNOT4O95628 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT4O95628 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT4O95628 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT4O95628 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT4O95628 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNOT4O95628 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT4O95628 AL161729.1-201ENST00000604104 1402 ntBASIC20.39■□□□□ 0.85
CNOT4O95628 KRT16P3-201ENST00000439127 1283 ntBASIC20.39■□□□□ 0.85
CNOT4O95628 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.39■□□□□ 0.85
CNOT4O95628 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CNOT4O95628 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.39■□□□□ 0.85
CNOT4O95628 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.39■□□□□ 0.85
CNOT4O95628 MTDHP2-201ENST00000601468 714 ntBASIC20.39■□□□□ 0.85
CNOT4O95628 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.39■□□□□ 0.85
CNOT4O95628 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT4O95628 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT4O95628 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT4O95628 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.39■□□□□ 0.85
CNOT4O95628 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT4O95628 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT4O95628 AC022211.4-201ENST00000625094 2161 ntBASIC20.38■□□□□ 0.85
CNOT4O95628 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT4O95628 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT4O95628 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT4O95628 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.38■□□□□ 0.85
CNOT4O95628 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT4O95628 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT4O95628 SNX5-217ENST00000606557 1087 ntBASIC20.38■□□□□ 0.85
CNOT4O95628 AC010997.5-201ENST00000609182 354 ntBASIC20.38■□□□□ 0.85
CNOT4O95628 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT4O95628 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT4O95628 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT4O95628 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT4O95628 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT4O95628 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT4O95628 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.37■□□□□ 0.85
CNOT4O95628 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 TSPY9P-201ENST00000440215 945 ntBASIC20.37■□□□□ 0.85
CNOT4O95628 TSPY11P-201ENST00000442607 1045 ntBASIC20.37■□□□□ 0.85
CNOT4O95628 AC004448.1-201ENST00000458332 883 ntBASIC20.37■□□□□ 0.85
CNOT4O95628 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT4O95628 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT4O95628 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.37■□□□□ 0.85
CNOT4O95628 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.37■□□□□ 0.85
CNOT4O95628 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT4O95628 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNOT4O95628 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.36■□□□□ 0.85
CNOT4O95628 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.36■□□□□ 0.85
CNOT4O95628 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT4O95628 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNOT4O95628 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.35■□□□□ 0.85
CNOT4O95628 AC142381.3-201ENST00000568208 1670 ntBASIC20.35■□□□□ 0.85
CNOT4O95628 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT4O95628 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms