Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.42■■□□□ 1.5
BEST1O76090 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.42■■□□□ 1.5
BEST1O76090 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.42■■□□□ 1.5
BEST1O76090 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.42■■□□□ 1.5
BEST1O76090 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BEST1O76090 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
BEST1O76090 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BEST1O76090 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BEST1O76090 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.41■■□□□ 1.5
BEST1O76090 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BEST1O76090 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
BEST1O76090 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
BEST1O76090 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
BEST1O76090 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.41■■□□□ 1.5
BEST1O76090 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
BEST1O76090 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
BEST1O76090 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BEST1O76090 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
BEST1O76090 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
BEST1O76090 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
BEST1O76090 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
BEST1O76090 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.4■■□□□ 1.5
BEST1O76090 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
BEST1O76090 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BEST1O76090 KRT16P3-201ENST00000439127 1283 ntBASIC24.39■■□□□ 1.49
BEST1O76090 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.39■■□□□ 1.49
BEST1O76090 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BEST1O76090 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BEST1O76090 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BEST1O76090 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
BEST1O76090 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BEST1O76090 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.38■■□□□ 1.49
BEST1O76090 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
BEST1O76090 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
BEST1O76090 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.38■■□□□ 1.49
BEST1O76090 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
BEST1O76090 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.37■■□□□ 1.49
BEST1O76090 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BEST1O76090 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BEST1O76090 AC010997.5-201ENST00000609182 354 ntBASIC24.37■■□□□ 1.49
BEST1O76090 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.37■■□□□ 1.49
BEST1O76090 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BEST1O76090 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
BEST1O76090 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BEST1O76090 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BEST1O76090 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BEST1O76090 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BEST1O76090 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
BEST1O76090 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BEST1O76090 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.36■■□□□ 1.49
BEST1O76090 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BEST1O76090 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.35■■□□□ 1.49
BEST1O76090 AC004448.1-201ENST00000458332 883 ntBASIC24.35■■□□□ 1.49
BEST1O76090 MTDHP2-201ENST00000601468 714 ntBASIC24.35■■□□□ 1.49
BEST1O76090 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.35■■□□□ 1.49
BEST1O76090 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.35■■□□□ 1.49
BEST1O76090 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BEST1O76090 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.34■■□□□ 1.49
BEST1O76090 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.34■■□□□ 1.49
BEST1O76090 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
BEST1O76090 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BEST1O76090 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BEST1O76090 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BEST1O76090 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.34■■□□□ 1.49
BEST1O76090 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BEST1O76090 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.34■■□□□ 1.49
BEST1O76090 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.34■■□□□ 1.49
BEST1O76090 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
BEST1O76090 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.33■■□□□ 1.49
BEST1O76090 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
BEST1O76090 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
BEST1O76090 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BEST1O76090 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.33■■□□□ 1.49
BEST1O76090 AC131212.1-201ENST00000613771 668 ntBASIC24.33■■□□□ 1.49
BEST1O76090 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.33■■□□□ 1.49
BEST1O76090 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.33■■□□□ 1.49
BEST1O76090 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
BEST1O76090 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.33■■□□□ 1.48
BEST1O76090 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
BEST1O76090 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.32■■□□□ 1.48
BEST1O76090 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
BEST1O76090 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BEST1O76090 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.32■■□□□ 1.48
BEST1O76090 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BEST1O76090 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BEST1O76090 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.31■■□□□ 1.48
BEST1O76090 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
BEST1O76090 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.31■■□□□ 1.48
BEST1O76090 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.31■■□□□ 1.48
BEST1O76090 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.31■■□□□ 1.48
BEST1O76090 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
BEST1O76090 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
BEST1O76090 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms