Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV6-1A0A0B4J1U7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 ABCB10P4-201ENST00000566803 2184 ntBASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 LINC01971-201ENST00000617888 1048 ntBASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 AC079834.2-201ENST00000609776 1949 ntBASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV6-1A0A0B4J1U7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV6-1A0A0B4J1U7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV6-1A0A0B4J1U7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L13-201ENST00000554103 1267 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L15-201ENST00000611059 1267 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L23-201ENST00000615195 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L24-201ENST00000617576 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L22-201ENST00000618238 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L20-201ENST00000619712 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L21-201ENST00000622058 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L10-201ENST00000622460 1267 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DUX4L25-201ENST00000624915 1269 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 AC004812.2-201ENST00000611079 2094 ntBASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV6-1A0A0B4J1U7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 AC126177.7-201ENST00000547904 679 ntBASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV6-1A0A0B4J1U7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IGHV6-1A0A0B4J1U7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
IGHV6-1A0A0B4J1U7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms