Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD1Q96PZ7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CSMD1Q96PZ7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD1Q96PZ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CSMD1Q96PZ7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CSMD1Q96PZ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20■□□□□ 0.79
CSMD1Q96PZ7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 AC066615.1-201ENST00000640911 628 ntBASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CSMD1Q96PZ7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSMD1Q96PZ7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSMD1Q96PZ7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.97■□□□□ 0.79
CSMD1Q96PZ7 KRT18P10-201ENST00000388836 1287 ntBASIC19.97■□□□□ 0.79
CSMD1Q96PZ7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CSMD1Q96PZ7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.96■□□□□ 0.79
CSMD1Q96PZ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CSMD1Q96PZ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSMD1Q96PZ7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSMD1Q96PZ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSMD1Q96PZ7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSMD1Q96PZ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSMD1Q96PZ7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.89■□□□□ 0.78
CSMD1Q96PZ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CSMD1Q96PZ7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.89■□□□□ 0.78
CSMD1Q96PZ7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.89■□□□□ 0.78
CSMD1Q96PZ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CSMD1Q96PZ7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSMD1Q96PZ7 LINC01003-201ENST00000564834 1764 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms