Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56Q96MV1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 C9orf163-202ENST00000624034 2573 ntBASIC19.05■□□□□ 0.64
TMEM56Q96MV1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56Q96MV1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56Q96MV1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 AL157400.5-201ENST00000507624 621 ntBASIC19.03■□□□□ 0.64
TMEM56Q96MV1 MIR7108-201ENST00000614319 87 ntBASIC19.03■□□□□ 0.64
TMEM56Q96MV1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56Q96MV1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56Q96MV1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM56Q96MV1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.02■□□□□ 0.63
TMEM56Q96MV1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM56Q96MV1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM56Q96MV1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56Q96MV1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56Q96MV1 AC060814.1-201ENST00000554326 538 ntBASIC19.01■□□□□ 0.63
TMEM56Q96MV1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM56Q96MV1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56Q96MV1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56Q96MV1 REST-210ENST00000638187 1334 ntTSL 5 BASIC19■□□□□ 0.63
TMEM56Q96MV1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM56Q96MV1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19■□□□□ 0.63
TMEM56Q96MV1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19■□□□□ 0.63
TMEM56Q96MV1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19■□□□□ 0.63
TMEM56Q96MV1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56Q96MV1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 SMPD5-203ENST00000639008 1464 ntBASIC18.99■□□□□ 0.63
TMEM56Q96MV1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56Q96MV1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM56Q96MV1 AL117328.2-201ENST00000624617 1940 ntBASIC18.98■□□□□ 0.63
TMEM56Q96MV1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56Q96MV1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56Q96MV1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms