Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF7Q8N684 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF7Q8N684 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CPSF7Q8N684 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF7Q8N684 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.62■■□□□ 1.21
CPSF7Q8N684 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.61■■□□□ 1.21
CPSF7Q8N684 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.61■■□□□ 1.21
CPSF7Q8N684 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.61■■□□□ 1.21
CPSF7Q8N684 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF7Q8N684 AC004987.1-201ENST00000428627 508 ntBASIC22.61■■□□□ 1.21
CPSF7Q8N684 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.61■■□□□ 1.21
CPSF7Q8N684 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CPSF7Q8N684 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.6■■□□□ 1.21
CPSF7Q8N684 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.6■■□□□ 1.21
CPSF7Q8N684 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 AC009831.1-201ENST00000580420 1582 ntBASIC22.6■■□□□ 1.21
CPSF7Q8N684 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 TSPY13P-201ENST00000338964 914 ntBASIC22.6■■□□□ 1.21
CPSF7Q8N684 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.6■■□□□ 1.21
CPSF7Q8N684 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.6■■□□□ 1.21
CPSF7Q8N684 AC133552.2-201ENST00000619106 1032 ntBASIC22.6■■□□□ 1.21
CPSF7Q8N684 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF7Q8N684 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF7Q8N684 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.59■■□□□ 1.21
CPSF7Q8N684 ATP5G2P3-201ENST00000429083 425 ntBASIC22.59■■□□□ 1.21
CPSF7Q8N684 AC025884.2-201ENST00000553429 711 ntBASIC22.59■■□□□ 1.21
CPSF7Q8N684 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CPSF7Q8N684 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF7Q8N684 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF7Q8N684 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CPSF7Q8N684 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF7Q8N684 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.58■■□□□ 1.21
CPSF7Q8N684 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF7Q8N684 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF7Q8N684 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CPSF7Q8N684 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF7Q8N684 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 AL592293.1-201ENST00000502889 1188 ntBASIC22.57■■□□□ 1.2
CPSF7Q8N684 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 HLA-L-211ENST00000482052 1765 ntBASIC22.57■■□□□ 1.2
CPSF7Q8N684 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF7Q8N684 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CPSF7Q8N684 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CPSF7Q8N684 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF7Q8N684 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPSF7Q8N684 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF7Q8N684 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.55■■□□□ 1.2
CPSF7Q8N684 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF7Q8N684 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF7Q8N684 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CPSF7Q8N684 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CPSF7Q8N684 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF7Q8N684 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CPSF7Q8N684 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF7Q8N684 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPSF7Q8N684 AC026202.3-201ENST00000600805 1127 ntBASIC22.54■■□□□ 1.2
CPSF7Q8N684 AC129492.7-201ENST00000622992 756 ntBASIC22.54■■□□□ 1.2
CPSF7Q8N684 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPSF7Q8N684 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.54■■□□□ 1.2
CPSF7Q8N684 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPSF7Q8N684 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CPSF7Q8N684 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.53■■□□□ 1.2
CPSF7Q8N684 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.53■■□□□ 1.2
CPSF7Q8N684 RP9P-202ENST00000450133 1212 ntBASIC22.53■■□□□ 1.2
CPSF7Q8N684 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.53■■□□□ 1.2
CPSF7Q8N684 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms