Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 AC011551.1-201ENST00000614101 683 ntBASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC9CQ8N5M4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 AL033527.3-201ENST00000566366 1196 ntBASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9CQ8N5M4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9CQ8N5M4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9CQ8N5M4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 AC010980.1-201ENST00000587192 1142 ntBASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 PVT1_1.1-201ENST00000615125 194 ntBASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9CQ8N5M4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.51
TTC9CQ8N5M4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC9CQ8N5M4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9CQ8N5M4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC9CQ8N5M4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TTC9CQ8N5M4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 KRT18P24-201ENST00000344739 1156 ntBASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TTC9CQ8N5M4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.22■□□□□ 0.51
TTC9CQ8N5M4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TTC9CQ8N5M4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms