Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00471Q8N535 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00471Q8N535 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00471Q8N535 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.19■□□□□ 0.98
LINC00471Q8N535 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00471Q8N535 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00471Q8N535 AC026202.3-201ENST00000600805 1127 ntBASIC21.18■□□□□ 0.98
LINC00471Q8N535 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00471Q8N535 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00471Q8N535 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC00471Q8N535 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.17■□□□□ 0.98
LINC00471Q8N535 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.17■□□□□ 0.98
LINC00471Q8N535 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00471Q8N535 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00471Q8N535 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00471Q8N535 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.16■□□□□ 0.98
LINC00471Q8N535 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00471Q8N535 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00471Q8N535 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
LINC00471Q8N535 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00471Q8N535 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00471Q8N535 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00471Q8N535 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00471Q8N535 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00471Q8N535 AL161729.1-201ENST00000604104 1402 ntBASIC21.14■□□□□ 0.98
LINC00471Q8N535 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
LINC00471Q8N535 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00471Q8N535 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
LINC00471Q8N535 MIR7108-201ENST00000614319 87 ntBASIC21.14■□□□□ 0.97
LINC00471Q8N535 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00471Q8N535 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00471Q8N535 AC079834.2-201ENST00000609776 1949 ntBASIC21.14■□□□□ 0.97
LINC00471Q8N535 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LINC00471Q8N535 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00471Q8N535 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00471Q8N535 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.13■□□□□ 0.97
LINC00471Q8N535 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC00471Q8N535 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00471Q8N535 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00471Q8N535 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LINC00471Q8N535 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00471Q8N535 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00471Q8N535 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00471Q8N535 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LINC00471Q8N535 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00471Q8N535 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
LINC00471Q8N535 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
LINC00471Q8N535 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00471Q8N535 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00471Q8N535 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00471Q8N535 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LINC00471Q8N535 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00471Q8N535 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.1■□□□□ 0.97
LINC00471Q8N535 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.1■□□□□ 0.97
LINC00471Q8N535 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00471Q8N535 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LINC00471Q8N535 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00471Q8N535 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.09■□□□□ 0.97
LINC00471Q8N535 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.09■□□□□ 0.97
LINC00471Q8N535 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00471Q8N535 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.09■□□□□ 0.97
LINC00471Q8N535 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms