Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 AC004448.1-201ENST00000458332 883 ntBASIC35.06■■■■□ 3.2
ABCA6Q8N139 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 AC139426.1-201ENST00000568218 2529 ntBASIC35.05■■■■□ 3.2
ABCA6Q8N139 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
ABCA6Q8N139 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC35.05■■■■□ 3.2
ABCA6Q8N139 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
ABCA6Q8N139 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.04■■■■□ 3.2
ABCA6Q8N139 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 AC090192.1-201ENST00000517740 490 ntBASIC35.03■■■■□ 3.2
ABCA6Q8N139 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
ABCA6Q8N139 GLI3-203ENST00000437480 451 ntTSL 2 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC35.03■■■■□ 3.2
ABCA6Q8N139 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC35.02■■■■□ 3.2
ABCA6Q8N139 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
ABCA6Q8N139 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC35.01■■■■□ 3.19
ABCA6Q8N139 AC011298.3-201ENST00000615796 283 ntBASIC35.01■■■■□ 3.19
ABCA6Q8N139 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC35■■■■□ 3.19
ABCA6Q8N139 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35■■■■□ 3.19
ABCA6Q8N139 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC35■■■■□ 3.19
ABCA6Q8N139 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35■■■■□ 3.19
ABCA6Q8N139 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC35■■■■□ 3.19
ABCA6Q8N139 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
ABCA6Q8N139 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
ABCA6Q8N139 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC34.99■■■■□ 3.19
ABCA6Q8N139 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
ABCA6Q8N139 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
ABCA6Q8N139 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC34.99■■■■□ 3.19
ABCA6Q8N139 SYT6-210ENST00000641643 1587 ntBASIC34.98■■■■□ 3.19
ABCA6Q8N139 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
ABCA6Q8N139 RHOF-204ENST00000537265 699 ntTSL 2 BASIC34.98■■■■□ 3.19
ABCA6Q8N139 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
ABCA6Q8N139 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
ABCA6Q8N139 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
ABCA6Q8N139 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
ABCA6Q8N139 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC34.97■■■■□ 3.19
ABCA6Q8N139 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
ABCA6Q8N139 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
ABCA6Q8N139 HACD1-201ENST00000326961 773 ntTSL 2 BASIC34.96■■■■□ 3.19
ABCA6Q8N139 IKBKGP1-201ENST00000612193 1073 ntBASIC34.96■■■■□ 3.19
ABCA6Q8N139 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC34.96■■■■□ 3.19
ABCA6Q8N139 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC34.96■■■■□ 3.19
ABCA6Q8N139 JTB-203ENST00000368589 1216 ntTSL 2 BASIC34.95■■■■□ 3.19
ABCA6Q8N139 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
ABCA6Q8N139 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC34.95■■■■□ 3.19
ABCA6Q8N139 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC34.95■■■■□ 3.19
ABCA6Q8N139 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
ABCA6Q8N139 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
ABCA6Q8N139 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC34.95■■■■□ 3.18
ABCA6Q8N139 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC34.95■■■■□ 3.18
ABCA6Q8N139 AC099791.1-201ENST00000416440 715 ntBASIC34.95■■■■□ 3.18
ABCA6Q8N139 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
ABCA6Q8N139 AC005703.6-201ENST00000623265 1329 ntBASIC34.94■■■■□ 3.18
ABCA6Q8N139 AC096887.2-201ENST00000623443 1957 ntBASIC34.94■■■■□ 3.18
ABCA6Q8N139 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
ABCA6Q8N139 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
ABCA6Q8N139 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC34.94■■■■□ 3.18
ABCA6Q8N139 RARRES2P11-201ENST00000635158 484 ntBASIC34.94■■■■□ 3.18
ABCA6Q8N139 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
ABCA6Q8N139 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
ABCA6Q8N139 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC34.93■■■■□ 3.18
ABCA6Q8N139 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
ABCA6Q8N139 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
ABCA6Q8N139 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC34.93■■■■□ 3.18
ABCA6Q8N139 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
ABCA6Q8N139 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
ABCA6Q8N139 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC34.93■■■■□ 3.18
ABCA6Q8N139 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA6Q8N139 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA6Q8N139 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
ABCA6Q8N139 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA6Q8N139 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA6Q8N139 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA6Q8N139 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA6Q8N139 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA6Q8N139 SHF-208ENST00000560734 1731 ntTSL 3 BASIC34.91■■■■□ 3.18
ABCA6Q8N139 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
ABCA6Q8N139 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
ABCA6Q8N139 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
ABCA6Q8N139 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC34.9■■■■□ 3.18
ABCA6Q8N139 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
ABCA6Q8N139 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA6Q8N139 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA6Q8N139 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC34.89■■■■□ 3.18
ABCA6Q8N139 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA6Q8N139 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA6Q8N139 IRS3P-201ENST00000223076 1006 ntBASIC34.88■■■■□ 3.17
ABCA6Q8N139 AL031602.1-201ENST00000633169 911 ntBASIC34.88■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms